RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 FETUBQ9UGM5 382 aa5.54□□□□□ -1.52
COPS3-209ENST00000486810 MOSPD1Q9UJG1 213 aa5.54□□□□□ -1.52
COPS3-209ENST00000486810 SLC8A2Q9UPR5 921 aa5.54□□□□□ -1.52
COPS3-209ENST00000486810 AP3M1Q9Y2T2 418 aa5.54□□□□□ -1.52
COPS3-209ENST00000486810 TTC21BQ7Z4L5 1316 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 SMIM31A0A1B0GVY4 71 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 SYNDIG1LA6NDD5 238 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 OR5K3A6NET4 321 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 CCDC69A6NI79 296 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 USP27XA6NNY8 438 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 ISM1B1AKI9 464 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 STMND1H3BQB6 276 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 DNM1LO00429 736 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 POLR1CO15160 346 aaPredicted RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 UFL1O94874 794 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 TRIM16O95361 564 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 FAM107AO95990 144 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 PLGP00747 810 aaPredicted RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 ASS1P00966 412 aaKnown RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 MT-ND3P03897 115 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 HEXBP07686 556 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 POLR2MP0CAP2 368 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 PABPC4LP0CB38 370 aaKnown RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 BRAFP15056 766 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 GNAZP19086 355 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 TFEBP19484 476 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 CAPN3P20807 821 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 PEX2P28328 305 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 PKLRP30613 574 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 IDUAP35475 653 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 PPP1R2P41236 205 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 IFNAR2P48551 515 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 DGKEP52429 567 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 HNRNPFP52597 415 aaKnown RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 P2RX3P56373 397 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 RAB14P61106 215 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 HAND2P61296 217 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 GNGT1P63211 74 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 EEF1A1P68104 462 aaKnown RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 NOP14P78316 857 aaKnown RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 BEX3Q00994 111 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 EEF1A2Q05639 463 aaKnown RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 LGALS3BPQ08380 585 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 TBX2Q13207 712 aaPredicted RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 POLD3Q15054 466 aaPredicted RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 TSC22D1Q15714 1073 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 MAPKAPK3Q16644 382 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 CEP55Q53EZ4 464 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 MAP3K21Q5TCX8 1036 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 EEF1A1P5Q5VTE0 462 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 SFRP4Q6FHJ7 346 aaPredicted RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 PPP1R2P3Q6NXS1 205 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 FBXO42Q6P3S6 717 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 AAGABQ6PD74 315 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 DARS2Q6PI48 645 aaKnown RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 PIK3AP1Q6ZUJ8 805 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 BRINP3Q76B58 766 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 PATL1Q86TB9 770 aaKnown RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 COMTD1Q86VU5 262 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 HEATR4Q86WZ0 1026 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 WDR49Q8IV35 697 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 CNTROBQ8N137 903 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 FAM133AQ8N9E0 248 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 IL17REQ8NFR9 667 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 SLC26A7Q8TE54 656 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 AGAP11Q8TF27 550 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 ZNF473Q8WTR7 871 aaKnown RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 RAPGEF4Q8WZA2 1011 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 CCT6BQ92526 530 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 RAPGEF5Q92565 580 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 NMD3Q96D46 503 aaKnown RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 RMND5BQ96G75 393 aaPredicted RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 PPP1R13BQ96KQ4 1090 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 TMEM68Q96MH6 324 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 MLPHQ9BV36 600 aaPredicted RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 DUSP26Q9BV47 211 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 ALG8Q9BVK2 526 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 LHX5Q9H2C1 402 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 OR51B5Q9H339 312 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 TFB2MQ9H5Q4 396 aaKnown RBP5.53□□□□□ -1.52
COPS3-209ENST00000486810 AZI2Q9H6S1 392 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 KIAA1586Q9HCI6 787 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 TUFT1Q9NNX1 390 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 SACM1LQ9NTJ5 587 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 ANKEF1Q9NU02 776 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 GIN1Q9NXP7 522 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 DLGAP2Q9P1A6 1054 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 ATP6V1HQ9UI12 483 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 ST3GAL5Q9UNP4 418 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 SHOC2Q9UQ13 582 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 ERVK-11Q9UQG0 969 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 MTMR6Q9Y217 621 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 INSL6Q9Y581 213 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 PCDHGB6Q9Y5F9 930 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 NUP160Q12769 1436 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 LMTK2Q8IWU2 1503 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 KIF21AQ7Z4S6 1674 aa5.53□□□□□ -1.52
COPS3-209ENST00000486810 GOLGA3Q08378 1498 aa5.52□□□□□ -1.53
COPS3-209ENST00000486810 FANCD2Q9BXW9 1451 aa5.52□□□□□ -1.53
COPS3-209ENST00000486810 ANKRD50Q9ULJ7 1429 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms