RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ITGA2BP08514 1039 aa22.44■■□□□ 1.18
SREBF1-214ENST00000486311 MYCLP1P12525 358 aaPredicted RBP22.44■■□□□ 1.18
SREBF1-214ENST00000486311 NFKBIAP25963 317 aa22.44■■□□□ 1.18
SREBF1-214ENST00000486311 MMP13P45452 471 aa22.44■■□□□ 1.18
SREBF1-214ENST00000486311 TPM4P67936 248 aa22.44■■□□□ 1.18
SREBF1-214ENST00000486311 ZBED6P86452 979 aa22.44■■□□□ 1.18
SREBF1-214ENST00000486311 EIF3IQ13347 325 aaKnown RBP22.44■■□□□ 1.18
SREBF1-214ENST00000486311 TSR1Q2NL82 804 aaKnown RBP22.44■■□□□ 1.18
SREBF1-214ENST00000486311 CERCAMQ5T4B2 595 aa22.44■■□□□ 1.18
SREBF1-214ENST00000486311 MARC1Q5VT66 337 aa22.44■■□□□ 1.18
SREBF1-214ENST00000486311 NUP85Q9BW27 656 aa22.44■■□□□ 1.18
SREBF1-214ENST00000486311 CPNE5Q9HCH3 593 aa22.44■■□□□ 1.18
SREBF1-214ENST00000486311 CYP4F12Q9HCS2 524 aa22.44■■□□□ 1.18
SREBF1-214ENST00000486311 RCOR3Q9P2K3 495 aaPredicted RBP22.44■■□□□ 1.18
SREBF1-214ENST00000486311 CYP2A6P11509 494 aaPredicted RBP22.43■■□□□ 1.18
SREBF1-214ENST00000486311 PNLIPP16233 465 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 GLB1P16278 677 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 IL4RP24394 825 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 MAXP61244 160 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 LUZP1Q86V48 1076 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 LRRC49Q8IUZ0 686 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 CCNJLQ8IV13 435 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 FAM71BQ8TC56 605 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 IQCDQ96DY2 449 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 DTD2Q96FN9 168 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 MCCC1Q96RQ3 725 aaPredicted RBP22.43■■□□□ 1.18
SREBF1-214ENST00000486311 TEX101Q9BY14 249 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 EPB41L5Q9HCM4 733 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 PHPT1Q9NRX4 125 aaPredicted RBP22.43■■□□□ 1.18
SREBF1-214ENST00000486311 CAPN11Q9UMQ6 739 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 LRRK1Q38SD2 2015 aa22.43■■□□□ 1.18
SREBF1-214ENST00000486311 A0A087X0T9 212 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 PRSS38A1L453 326 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 ERVH48-1M5A8F1 160 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 PSMD11O00231 422 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 PLD2O14939 933 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 C1QL1O75973 258 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 PGLSO95336 258 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 FAM228BP0C875 321 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 LHCGRP22888 699 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 CCKBRP32239 447 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 ETV3P41162 512 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 INHBCP55103 352 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 UBASH3AP57075 661 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 C19orf57Q0VDD7 668 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 HLTFQ14527 1009 aaKnown RBP eCLIP22.42■■□□□ 1.18
SREBF1-214ENST00000486311 KRT81Q14533 505 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 C14orf28Q4W4Y0 310 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 PCSK4Q6UW60 755 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 HSD11B1LQ7Z5J1 315 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 FBXO39Q8N4B4 442 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 TEX26Q8N6G2 289 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 CCL4L1Q8NHW4 92 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 SNRNP27Q8WVK2 155 aaKnown RBP22.42■■□□□ 1.18
SREBF1-214ENST00000486311 SCRN2Q96FV2 425 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 TMEM74Q96NL1 305 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 STRADBQ9C0K7 418 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 MOSPD1Q9UJG1 213 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 PPIL1Q9Y3C6 166 aa22.42■■□□□ 1.18
SREBF1-214ENST00000486311 SYCE3A1L190 88 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 NPIPB15A6NHN6 443 aaPredicted RBP22.41■■□□□ 1.18
SREBF1-214ENST00000486311 MYO1FO00160 1098 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 TEAD1P28347 426 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 RHDQ02161 417 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 ARMC12Q5T9G4 340 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 ARHGAP40Q5TG30 622 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 DENND2CQ68D51 928 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 SPECC1LQ69YQ0 1117 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 ALKBH5Q6P6C2 394 aaKnown RBP22.41■■□□□ 1.18
SREBF1-214ENST00000486311 RAB11FIP2Q7L804 512 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 HEATR4Q86WZ0 1026 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 SFTPA2Q8IWL1 248 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 Q8N9G6 341 aaPredicted RBP22.41■■□□□ 1.18
SREBF1-214ENST00000486311 GPBAR1Q8TDU6 330 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 CPLX3Q8WVH0 158 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 FOXP3Q9BZS1 431 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 DPEP2Q9H4A9 486 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 CARS2Q9HA77 564 aaKnown RBP22.41■■□□□ 1.18
SREBF1-214ENST00000486311 RNF215Q9Y6U7 377 aa22.41■■□□□ 1.18
SREBF1-214ENST00000486311 LRP4O75096 1905 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 B4DGG1 531 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 NUDT21O43809 227 aaKnown RBP22.4■■□□□ 1.18
SREBF1-214ENST00000486311 CEACAM5P06731 702 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 CD48P09326 243 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 CCNB1P14635 433 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 UGT1A5P35504 534 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 ARSEP51690 589 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 VAC14Q08AM6 782 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 MMRN1Q13201 1228 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 HADHQ16836 314 aaKnown RBP22.4■■□□□ 1.18
SREBF1-214ENST00000486311 CCDC122Q5T0U0 273 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 USP45Q70EL2 814 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 SPRED1Q7Z699 444 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 PIH1D2Q8WWB5 315 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 FRMD8Q9BZ67 464 aaPredicted RBP22.4■■□□□ 1.18
SREBF1-214ENST00000486311 NT5MQ9NPB1 228 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 LRIT1Q9P2V4 623 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 LUC7L2Q9Y383 392 aaKnown RBP22.4■■□□□ 1.18
SREBF1-214ENST00000486311 PCDHGA7Q9Y5G6 932 aa22.4■■□□□ 1.18
SREBF1-214ENST00000486311 CFAP46Q8IYW2 2715 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms