RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CYBBP04839 570 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 ESRRAP11474 423 aaPredicted RBP11.96□□□□□ -0.49
PKP4-213ENST00000486254 ZNF37AP17032 561 aaPredicted RBP11.96□□□□□ -0.49
PKP4-213ENST00000486254 HMGCLP35914 325 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 RPL14P50914 215 aaKnown RBP11.96□□□□□ -0.49
PKP4-213ENST00000486254 CYP4F8P98187 520 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 SATB1Q01826 763 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 DMC1Q14565 340 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 DNAL1Q4LDG9 190 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 ZNF789Q5FWF6 425 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 PPM1LQ5SGD2 360 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 WASHC2DQ5SRD0 308 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 TMEM240Q5SV17 173 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 PDE12Q6L8Q7 609 aaKnown RBP11.96□□□□□ -0.49
PKP4-213ENST00000486254 TTC7BQ86TV6 843 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 KIF2BQ8N4N8 673 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 MAB21L3Q8N8X9 362 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 TXNDC5Q8NBS9 432 aaKnown RBP11.96□□□□□ -0.49
PKP4-213ENST00000486254 OR13C4Q8NGS5 318 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 OTUB2Q96DC9 234 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 L3HYPDHQ96EM0 354 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 RILPQ96NA2 401 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 ASB2Q96Q27 587 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 TUBGCP5Q96RT8 1024 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 LYSMD1Q96S90 227 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 TCF25Q9BQ70 676 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 ZBED2Q9BTP6 218 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 CCDC28BQ9BUN5 200 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 SYTL2Q9HCH5 934 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 CPSF2Q9P2I0 782 aaKnown RBP11.96□□□□□ -0.49
PKP4-213ENST00000486254 TRIM33Q9UPN9 1127 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 HS3ST2Q9Y278 367 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 KCTD3Q9Y597 815 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 SCN8AQ9UQD0 1980 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 A0A1W2PQ67 120 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 LEFTY2O00292 366 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 HGSO14964 777 aaPredicted RBP11.96□□□□□ -0.5
PKP4-213ENST00000486254 CHUKO15111 745 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 PAPLNO95428 1278 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 RB1P06400 928 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 CCDC166P0CW27 439 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 KITP10721 976 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 SAT1P21673 171 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 PMLP29590 882 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 GMPRP36959 345 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 AVPR1AP37288 418 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 PTPN5P54829 565 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 ATP6V0D1P61421 351 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 CSHL1Q14406 222 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 ZNF460Q14592 562 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 PLEKHG6Q3KR16 790 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 CFAP157Q5JU67 520 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 ARMC12Q5T9G4 340 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 SEL1L3Q68CR1 1132 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 CERS6Q6ZMG9 384 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 ATG14Q6ZNE5 492 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 TMPRSS6Q8IU80 811 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 BBS7Q8IWZ6 715 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 PLPP6Q8IY26 295 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 AFAP1L2Q8N4X5 818 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 ZNF781Q8N8C0 355 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 LPCAT1Q8NF37 534 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 MDGA1Q8NFP4 955 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 OR4K2Q8NGD2 314 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 MYO19Q96H55 970 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 NDNQ99608 321 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 EBF4Q9BQW3 602 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 CEP44Q9C0F1 390 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 DERL2Q9GZP9 239 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 MTIF3Q9H2K0 278 aaKnown RBP11.96□□□□□ -0.5
PKP4-213ENST00000486254 TFB2MQ9H5Q4 396 aaKnown RBP11.96□□□□□ -0.5
PKP4-213ENST00000486254 EML4Q9HC35 981 aaKnown RBP11.96□□□□□ -0.5
PKP4-213ENST00000486254 TLR9Q9NR96 1032 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 PNPOQ9NVS9 261 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.96□□□□□ -0.5
PKP4-213ENST00000486254 TAS2R13Q9NYV9 303 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 DPP7Q9UHL4 492 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 TMCO1Q9UM00 188 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 ACTL7AQ9Y615 435 aa11.96□□□□□ -0.5
PKP4-213ENST00000486254 OAS3Q9Y6K5 1087 aaKnown RBP11.96□□□□□ -0.5
PKP4-213ENST00000486254 A0A1W2PRU2 124 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 LCHNA4D1U4 455 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 A8MT66 165 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 STX7O15400 261 aaKnown RBP11.95□□□□□ -0.5
PKP4-213ENST00000486254 MAGEC1O60732 1142 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 IGSF6O95976 241 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 PYGLP06737 847 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 PDHA1P08559 390 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 F7P08709 466 aaPredicted RBP11.95□□□□□ -0.5
PKP4-213ENST00000486254 TFEBP19484 476 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 GLRBP48167 497 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 VASPP50552 380 aaPredicted RBP11.95□□□□□ -0.5
PKP4-213ENST00000486254 NAGLUP54802 743 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 CDKN2DP55273 166 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 ARHGAP15Q53QZ3 475 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 ARL13AQ5H913 290 aaPredicted RBP11.95□□□□□ -0.5
PKP4-213ENST00000486254 ZNF549Q6P9A3 640 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 TRIM67Q6ZTA4 783 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 ISCA2Q86U28 154 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 TREML1Q86YW5 311 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms