RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 PCDH12Q9NPG4 1184 aa9.65□□□□□ -0.86
PTPN7-213ENST00000486116 PIGVQ9NUD9 493 aa9.65□□□□□ -0.86
PTPN7-213ENST00000486116 TRNAU1APQ9NX07 287 aaKnown RBP9.65□□□□□ -0.86
PTPN7-213ENST00000486116 ARHGEF38Q9NXL2 777 aa9.65□□□□□ -0.86
PTPN7-213ENST00000486116 KLHL3Q9UH77 587 aa9.65□□□□□ -0.86
PTPN7-213ENST00000486116 SMC3Q9UQE7 1217 aa9.65□□□□□ -0.86
PTPN7-213ENST00000486116 OSGIN2Q9Y236 505 aa9.65□□□□□ -0.86
PTPN7-213ENST00000486116 COQ4Q9Y3A0 265 aa9.65□□□□□ -0.86
PTPN7-213ENST00000486116 PCDHB4Q9Y5E5 795 aa9.65□□□□□ -0.86
PTPN7-213ENST00000486116 MAP1AP78559 2803 aaPredicted RBP9.64□□□□□ -0.87
PTPN7-213ENST00000486116 C21orf140B9A014 251 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 E2F3O00716 465 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 GRAP2O75791 330 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 NDUFA10O95299 355 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 CEACAM5P06731 702 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 BPIP17213 487 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 GM2AP17900 193 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 TBXAS1P24557 533 aaPredicted RBP9.64□□□□□ -0.87
PTPN7-213ENST00000486116 MMP12P39900 470 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 GNPDA1P46926 289 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 FASLGP48023 281 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 CTBSQ01459 385 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 PTK2Q05397 1052 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 ART3Q13508 389 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 POLD3Q15054 466 aaPredicted RBP9.64□□□□□ -0.87
PTPN7-213ENST00000486116 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.64□□□□□ -0.87
PTPN7-213ENST00000486116 TMEM110Q86TL2 294 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 SLC37A2Q8TED4 501 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 SEC14L1Q92503 715 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 NCSTNQ92542 709 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 KAT5Q92993 513 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 MED15Q96RN5 788 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 SLC38A3Q99624 504 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 SMAD5Q99717 465 aaKnown RBP9.64□□□□□ -0.87
PTPN7-213ENST00000486116 TKTL2Q9H0I9 626 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 WDR26Q9H7D7 661 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 AKIRIN1Q9H9L7 192 aaPredicted RBP9.64□□□□□ -0.87
PTPN7-213ENST00000486116 LHX9Q9NQ69 397 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 EXOC1Q9NV70 894 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 FAM13BQ9NYF5 915 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 PADI1Q9ULC6 663 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 PLEKHM1Q9Y4G2 1056 aa9.64□□□□□ -0.87
PTPN7-213ENST00000486116 KLF2Q9Y5W3 355 aaPredicted RBP9.64□□□□□ -0.87
PTPN7-213ENST00000486116 COPG1Q9Y678 874 aaKnown RBP9.64□□□□□ -0.87
PTPN7-213ENST00000486116 CACNA1CQ13936 2221 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 TRBV23OR9-2A0A075B6M9 112 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 CXorf51AA0A1B0GTR3 108 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 TSPAN11A1L157 253 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 A6NL46 340 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 INSIG1O15503 277 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 POLR2DO15514 142 aaKnown RBP9.63□□□□□ -0.87
PTPN7-213ENST00000486116 BUB1BO60566 1050 aaPredicted RBP9.63□□□□□ -0.87
PTPN7-213ENST00000486116 FAM155BO75949 473 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 RECQL5O94762 991 aaPredicted RBP9.63□□□□□ -0.87
PTPN7-213ENST00000486116 PIGNO95427 931 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 ANKRD34CP0C6C1 535 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 CCNYL3P0C7X3 344 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 MYCLP1P12525 358 aaPredicted RBP9.63□□□□□ -0.87
PTPN7-213ENST00000486116 DRD2P14416 443 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 COX6B1P14854 86 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 TFE3P19532 575 aaPredicted RBP9.63□□□□□ -0.87
PTPN7-213ENST00000486116 XPAP23025 273 aaPredicted RBP9.63□□□□□ -0.87
PTPN7-213ENST00000486116 SUOXP51687 545 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 SH3BP2P78314 561 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 RALGDSQ12967 914 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 ADAM9Q13443 819 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 SMTNL2Q2TAL5 461 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 LRRC31Q6UY01 552 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 FJX1Q86VR8 437 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 RASGRP3Q8IV61 690 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 DRC7Q8IY82 874 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 NETO2Q8NC67 525 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 ADAMTS17Q8TE56 1095 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 STK32AQ8WU08 396 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 ELMO2Q96JJ3 720 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 GDAP1L1Q96MZ0 367 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 TMUB1Q9BVT8 246 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 REPIN1Q9BWE0 567 aaKnown RBP9.63□□□□□ -0.87
PTPN7-213ENST00000486116 LNPEPQ9UIQ6 1025 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 SUFUQ9UMX1 484 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 B3GNT3Q9Y2A9 372 aa9.63□□□□□ -0.87
PTPN7-213ENST00000486116 MN1Q10571 1320 aaPredicted RBP9.62□□□□□ -0.87
PTPN7-213ENST00000486116 SSU72P8A0A1W2PR75 194 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 ZNF185O15231 689 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 TEX33O43247 280 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 STX10O60499 249 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 SPAG6O75602 509 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 RHOBTB3O94955 611 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 TIAF1O95411 115 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 EML2O95834 649 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 CD1EP15812 388 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 PTPN4P29074 926 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 ADCY8P40145 1251 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 ACTR1BP42025 376 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 CXCR3P49682 368 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 ACTR1AP61163 376 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 UGP2Q16851 508 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 FAM199XQ6PEV8 388 aaPredicted RBP9.62□□□□□ -0.87
PTPN7-213ENST00000486116 SYVN1Q86TM6 617 aa9.62□□□□□ -0.87
PTPN7-213ENST00000486116 KCNMB4Q86W47 210 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms