RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 MAD1L1Q9Y6D9 718 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 TEX264Q9Y6I9 313 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 TBC1D3DA0A087WVF3 549 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 TBC1D3IA0A087WXS9 549 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 TBC1D3EA0A087X179 549 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 TBC1D3KA0A087X1G2 549 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 IGHV1OR15-9A0A0B4J2B8 117 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 TBC1D3FA6NER0 549 aaPredicted RBP17.58■□□□□ 0.4
CHMP3-207ENST00000485465 LRRC72A6NJI9 287 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 PRR33A8MZF0 331 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 TBC1D3LB9A6J9 549 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 BUD23O43709 281 aaKnown RBP17.58■□□□□ 0.4
CHMP3-207ENST00000485465 MMP20O60882 483 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 SLC4A1P02730 911 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 C1SP09871 688 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 ELFN1P0C7U0 828 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 TBC1D3HP0C7X1 549 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 LPOP22079 712 aaPredicted RBP17.58■□□□□ 0.4
CHMP3-207ENST00000485465 HMGCLP35914 325 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 ELK3P41970 407 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 FNTBP49356 437 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 PDE1BQ01064 536 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 USP39Q53GS9 565 aaKnown RBP17.58■□□□□ 0.4
CHMP3-207ENST00000485465 HP1BP3Q5SSJ5 553 aaPredicted RBP17.58■□□□□ 0.4
CHMP3-207ENST00000485465 TBC1D3GQ6DHY5 549 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 TBC1D3CQ6IPX1 549 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 NEK5Q6P3R8 708 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 NLRP9Q7RTR0 991 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 WDR5BQ86VZ2 330 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 IGDCC3Q8IVU1 814 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 GSPT2Q8IYD1 628 aaKnown RBP17.58■□□□□ 0.4
CHMP3-207ENST00000485465 TBC1D3Q8IZP1 549 aaPredicted RBP17.58■□□□□ 0.4
CHMP3-207ENST00000485465 FRMD1Q8N878 549 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 OR2T34Q8NGX1 318 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 STAMBPL1Q96FJ0 436 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 TOE1Q96GM8 510 aaKnown RBP17.58■□□□□ 0.4
CHMP3-207ENST00000485465 EBNA1BP2Q99848 306 aaKnown RBP17.58■□□□□ 0.4
CHMP3-207ENST00000485465 WDR83Q9BRX9 315 aaKnown RBP17.58■□□□□ 0.4
CHMP3-207ENST00000485465 CHRAC1Q9NRG0 131 aa17.58■□□□□ 0.4
CHMP3-207ENST00000485465 FAM47DPA6NHR8 397 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 PSMD11O00231 422 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 RNGTTO60942 597 aaKnown RBP17.57■□□□□ 0.4
CHMP3-207ENST00000485465 SEMA4FO95754 770 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 FAM153BP0C7A2 387 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 C6P13671 934 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 ZNF140P52738 457 aaPredicted RBP17.57■□□□□ 0.4
CHMP3-207ENST00000485465 FASTKD3Q14CZ7 662 aaKnown RBP17.57■□□□□ 0.4
CHMP3-207ENST00000485465 FAM153CQ494X1 144 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 TSTD2Q5T7W7 516 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 KIAA1161Q6NSJ0 714 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 HSD11B1LQ7Z5J1 315 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 ANKMY2Q8IV38 441 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 ZBED8Q8IZ13 594 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 FAM160A2Q8N612 972 aaPredicted RBP17.57■□□□□ 0.4
CHMP3-207ENST00000485465 FBXO36Q8NEA4 188 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 STYXQ8WUJ0 223 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 COQ10AQ96MF6 247 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 NAT9Q9BTE0 207 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 IL17CQ9P0M4 197 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 RIMKLBQ9ULI2 386 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 ZFR2Q9UPR6 939 aaKnown RBP17.57■□□□□ 0.4
CHMP3-207ENST00000485465 CHMP2BQ9UQN3 213 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 INVSQ9Y283 1065 aa17.57■□□□□ 0.4
CHMP3-207ENST00000485465 FAM237BA0A1B0GVD1 139 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 A0A1W2PQU0 124 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 CCDC78A2IDD5 438 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 PRR23AA6NEV1 266 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 IGLON5A6NGN9 336 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 STX7O15400 261 aaKnown RBP17.56■□□□□ 0.4
CHMP3-207ENST00000485465 LZTS3O60299 673 aaPredicted RBP17.56■□□□□ 0.4
CHMP3-207ENST00000485465 GM2AP17900 193 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 PGAM1P18669 254 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 PSMA3P25788 255 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 NMBRP28336 390 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 MAGEA4P43358 317 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 RPS21P63220 83 aaKnown RBP17.56■□□□□ 0.4
CHMP3-207ENST00000485465 PTPRCAPQ14761 206 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 ACOX1Q15067 660 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 SKIDA1Q1XH10 827 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 SEL1L3Q68CR1 1132 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 TECPR1Q7Z6L1 1165 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 TMEM135Q86UB9 458 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 LONP2Q86WA8 852 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 HORMAD1Q86X24 394 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 RELL1Q8IUW5 271 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 CCNJLQ8IV13 435 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 RAVER1Q8IY67 606 aaKnown RBP17.56■□□□□ 0.4
CHMP3-207ENST00000485465 OR4K2Q8NGD2 314 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 OR13C4Q8NGS5 318 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 PYROXD1Q8WU10 500 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 PEX13Q92968 403 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 SPACA7Q96KW9 195 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 ZNF778Q96MU6 729 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 C19orf43Q9BQ61 176 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 BPIFA1Q9NP55 256 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 NLE1Q9NVX2 485 aaPredicted RBP17.56■□□□□ 0.4
CHMP3-207ENST00000485465 PKD2L2Q9NZM6 624 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 SLC2A6Q9UGQ3 507 aa17.56■□□□□ 0.4
CHMP3-207ENST00000485465 MBD1Q9UIS9 605 aaPredicted RBP17.56■□□□□ 0.4
CHMP3-207ENST00000485465 PKP3Q9Y446 797 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms