RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TRBC1P01850 177 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 MMP2P08253 660 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 TSHRP16473 764 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 ZFXP17010 805 aaPredicted RBP12.29□□□□□ -0.44
MSH5-216ENST00000484309 ACP1P24666 158 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 NFKBIAP25963 317 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 HTR1BP28222 390 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 PEX5P50542 639 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 IFI35P80217 286 aaPredicted RBP12.29□□□□□ -0.44
MSH5-216ENST00000484309 PDK1Q15118 436 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 SMAD1Q15797 465 aaKnown RBP12.29□□□□□ -0.44
MSH5-216ENST00000484309 CDKN3Q16667 212 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 HES3Q5TGS1 186 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 LRRC66Q68CR7 880 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 Q6ZVL8 140 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 KIAA1328Q86T90 577 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 TMEM139Q8IV31 216 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 KATNAL2Q8IYT4 538 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 GALNT15Q8N3T1 639 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 BTN2A2Q8WVV5 523 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 OR1E3Q8WZA6 343 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 SPOCK2Q92563 424 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 FATE1Q969F0 183 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 DTD2Q96FN9 168 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 SCRN2Q96FV2 425 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 AGAP3Q96P47 875 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 RBM15Q96T37 977 aaKnown RBP eCLIP12.29□□□□□ -0.445e-7■■□□□ 13
MSH5-216ENST00000484309 BAG1Q99933 345 aaPredicted RBP12.29□□□□□ -0.44
MSH5-216ENST00000484309 LGR4Q9BXB1 951 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 BRD8Q9H0E9 1235 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 PCDH9Q9HC56 1237 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 FGF22Q9HCT0 170 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 MRPL40Q9NQ50 206 aaKnown RBP12.29□□□□□ -0.44
MSH5-216ENST00000484309 HAUS2Q9NVX0 235 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 AMACRQ9UHK6 382 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 MOSPD1Q9UJG1 213 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 PCDHGA1Q9Y5H4 931 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 U3KQA8 63 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 hCG_1818297A0A087WSY0 165 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 CPED1A4D0V7 1026 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 F5H423 210 aaPredicted RBP12.28□□□□□ -0.44
MSH5-216ENST00000484309 RASGRP1O95267 797 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 PRLP01236 227 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 ANXA6P08133 673 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 C1SP09871 688 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 CKMT1AP12532 417 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 CTSEP14091 401 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 CDC25BP30305 580 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 VAV2P52735 878 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 HK3P52790 923 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 KIAA1024LP59773 190 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 SRP54P61011 504 aaKnown RBP12.28□□□□□ -0.44
MSH5-216ENST00000484309 SKOR1P84550 965 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 TFDP2Q14188 446 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 GALNT3Q14435 633 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 PCSK7Q16549 785 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 TAZQ16635 292 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 TFDP3Q5H9I0 405 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 RAET1GQ6H3X3 334 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 ESRP1Q6NXG1 681 aaKnown RBP12.28□□□□□ -0.44
MSH5-216ENST00000484309 ZCCHC8Q6NZY4 707 aaKnown RBP12.28□□□□□ -0.44
MSH5-216ENST00000484309 PNCKQ6P2M8 343 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 CRTC1Q6UUV9 634 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 KDELC2Q7Z4H8 507 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 ZC3H18Q86VM9 953 aaKnown RBP12.28□□□□□ -0.44
MSH5-216ENST00000484309 HEATR4Q86WZ0 1026 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 NDUFAF2Q8N183 169 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 MDM1Q8TC05 714 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 HERPUD2Q9BSE4 406 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 DUSP23Q9BVJ7 150 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 HEMGNQ9BXL5 484 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 WDR26Q9H7D7 661 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 SIRPGQ9P1W8 387 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 TRIM10Q9UDY6 481 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 ZMIZ1Q9ULJ6 1067 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 DOLKQ9UPQ8 538 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 CSNK1G3Q9Y6M4 447 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 ACACAQ13085 2346 aa12.28□□□□□ -0.44
MSH5-216ENST00000484309 UNC13CQ8NB66 2214 aa12.27□□□□□ -0.44
MSH5-216ENST00000484309 APC2O95996 2303 aa12.27□□□□□ -0.44
MSH5-216ENST00000484309 CAPN8A6NHC0 703 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 YY2O15391 372 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 ZRANB2O95218 330 aaKnown RBP eCLIP12.27□□□□□ -0.45
MSH5-216ENST00000484309 CLDN7O95471 211 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 JUPP14923 745 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 TGM2P21980 687 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 CA4P22748 312 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 CES1P23141 567 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 PTPN3P26045 913 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 INSM1Q01101 510 aaPredicted RBP12.27□□□□□ -0.45
MSH5-216ENST00000484309 PRKD1Q15139 912 aaPredicted RBP12.27□□□□□ -0.45
MSH5-216ENST00000484309 QPCTQ16769 361 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 GUSBP11Q6P575 273 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 DOK6Q6PKX4 331 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 RCOR2Q8IZ40 523 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 OR56A4Q8NGH8 313 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 ATL2Q8NHH9 583 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 EXD1Q8NHP7 514 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 SPATA22Q8NHS9 363 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 IFI44Q8TCB0 444 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms