RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ZNF711Q9Y462 761 aa26.26■■□□□ 1.79
SHOX2-204ENST00000483851 A0A087X1B8 175 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 A0A0J9YYE9 177 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 WASH3PC4AMC7 463 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 TRBC1P01850 177 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 NNMTP40261 264 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 VIPR2P41587 438 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 TMPRSS15P98073 1019 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 HYAL1Q12794 435 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 PDGFRLQ15198 375 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 DLG2Q15700 870 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 FASTKD1Q53R41 847 aaKnown RBP26.25■■□□□ 1.79
SHOX2-204ENST00000483851 ECHDC3Q96DC8 303 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 ELMO2Q96JJ3 720 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 LYSMD1Q96S90 227 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 OMDQ99983 421 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 SUDS3Q9H7L9 328 aaPredicted RBP26.25■■□□□ 1.79
SHOX2-204ENST00000483851 SLC8A2Q9UPR5 921 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 ERVW-1Q9UQF0 538 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 PPIL1Q9Y3C6 166 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 PFDN6O15212 129 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 BUD23O43709 281 aaKnown RBP26.25■■□□□ 1.79
SHOX2-204ENST00000483851 SRPRAP08240 638 aaKnown RBP26.25■■□□□ 1.79
SHOX2-204ENST00000483851 CISD3P0C7P0 127 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 SLC35E2BP0CK96 405 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 DGKGP49619 791 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 TSNAXIP1Q2TAA8 658 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 OTOAQ7RTW8 1153 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 SLC41A1Q8IVJ1 513 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 RYBPQ8N488 228 aaPredicted RBP26.25■■□□□ 1.79
SHOX2-204ENST00000483851 RDH11Q8TC12 318 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 KLC4Q9NSK0 619 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 MARCH4Q9P2E8 410 aaPredicted RBP26.25■■□□□ 1.79
SHOX2-204ENST00000483851 PKP3Q9Y446 797 aa26.25■■□□□ 1.79
SHOX2-204ENST00000483851 CCL22O00626 93 aa26.24■■□□□ 1.79
SHOX2-204ENST00000483851 F7P08709 466 aaPredicted RBP26.24■■□□□ 1.79
SHOX2-204ENST00000483851 STC1P52823 247 aa26.24■■□□□ 1.79
SHOX2-204ENST00000483851 PTPRCAPQ14761 206 aa26.24■■□□□ 1.79
SHOX2-204ENST00000483851 FAM45BPQ6NSW5 357 aa26.24■■□□□ 1.79
SHOX2-204ENST00000483851 SYCE2Q6PIF2 218 aa26.24■■□□□ 1.79
SHOX2-204ENST00000483851 MFSD6LQ8IWD5 586 aa26.24■■□□□ 1.79
SHOX2-204ENST00000483851 TDHQ8IZJ6 230 aa26.24■■□□□ 1.79
SHOX2-204ENST00000483851 GPATCH11Q8N954 259 aa26.24■■□□□ 1.79
SHOX2-204ENST00000483851 OR6K2Q8NGY2 324 aa26.24■■□□□ 1.79
SHOX2-204ENST00000483851 FAM45AQ8TCE6 357 aa26.24■■□□□ 1.79
SHOX2-204ENST00000483851 C1QTNF1Q9BXJ1 281 aa26.24■■□□□ 1.79
SHOX2-204ENST00000483851 IL17CQ9P0M4 197 aa26.24■■□□□ 1.79
SHOX2-204ENST00000483851 CDH7Q9ULB5 785 aa26.24■■□□□ 1.79
SHOX2-204ENST00000483851 PIGNO95427 931 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 TOP3BO95985 862 aaKnown RBP26.23■■□□□ 1.79
SHOX2-204ENST00000483851 ATP5BP06576 529 aaKnown RBP26.23■■□□□ 1.79
SHOX2-204ENST00000483851 BGNP21810 368 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 SLC26A3P40879 764 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 KPNA2P52292 529 aaKnown RBP26.23■■□□□ 1.79
SHOX2-204ENST00000483851 TAS2R39P59534 338 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 ACCSLQ4AC99 568 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 GET4Q7L5D6 327 aaPredicted RBP26.23■■□□□ 1.79
SHOX2-204ENST00000483851 C10orf82Q8WW14 230 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 TSSK1BQ9BXA7 367 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 GPR63Q9BZJ6 419 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 SUV39H2Q9H5I1 410 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 COPG2Q9UBF2 871 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 VWA7Q9Y334 891 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 USH1CQ9Y6N9 552 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 KIF26AQ9ULI4 1882 aaPredicted RBP26.23■■□□□ 1.79
SHOX2-204ENST00000483851 CFAP73A6NFT4 308 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 OR51F1A6NGY5 319 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 HEPACAM2A8MVW5 462 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 TGDSO95455 350 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 RECQLP46063 649 aaPredicted RBP26.23■■□□□ 1.79
SHOX2-204ENST00000483851 CCNHP51946 323 aaPredicted RBP26.23■■□□□ 1.79
SHOX2-204ENST00000483851 TMEM215Q68D42 235 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 C16orf46Q6P387 395 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 CYB5D1Q6P9G0 228 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 SUGP1Q8IWZ8 645 aaKnown RBP26.23■■□□□ 1.79
SHOX2-204ENST00000483851 ETFBKMTQ8IXQ9 262 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 PLD6Q8N2A8 252 aaKnown RBP26.23■■□□□ 1.79
SHOX2-204ENST00000483851 NAT16Q8N8M0 369 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 VOPP1Q96AW1 172 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 FAM83CQ9BQN1 747 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 NMRAL1Q9HBL8 299 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 POLR3BQ9NW08 1133 aaPredicted RBP26.23■■□□□ 1.79
SHOX2-204ENST00000483851 SLCO3A1Q9UIG8 710 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 TRANK1O15050 2925 aa26.23■■□□□ 1.79
SHOX2-204ENST00000483851 CAPN8A6NHC0 703 aa26.22■■□□□ 1.79
SHOX2-204ENST00000483851 RFXAPO00287 272 aa26.22■■□□□ 1.79
SHOX2-204ENST00000483851 PMLP29590 882 aa26.22■■□□□ 1.79
SHOX2-204ENST00000483851 GEN1Q17RS7 908 aa26.22■■□□□ 1.79
SHOX2-204ENST00000483851 ZNF789Q5FWF6 425 aa26.22■■□□□ 1.79
SHOX2-204ENST00000483851 TCEAL5Q5H9L2 206 aa26.22■■□□□ 1.79
SHOX2-204ENST00000483851 AARS2Q5JTZ9 985 aaKnown RBP26.22■■□□□ 1.79
SHOX2-204ENST00000483851 CEP97Q8IW35 865 aa26.22■■□□□ 1.79
SHOX2-204ENST00000483851 ZNF398Q8TD17 642 aa26.22■■□□□ 1.79
SHOX2-204ENST00000483851 C7orf26Q96N11 449 aa26.22■■□□□ 1.79
SHOX2-204ENST00000483851 ECT2Q9H8V3 914 aa26.22■■□□□ 1.79
SHOX2-204ENST00000483851 POPDC3Q9HBV1 291 aa26.22■■□□□ 1.79
SHOX2-204ENST00000483851 ZFP14Q9HCL3 533 aa26.22■■□□□ 1.79
SHOX2-204ENST00000483851 PHGDHO43175 533 aaKnown RBP26.21■■□□□ 1.79
SHOX2-204ENST00000483851 SAT1P21673 171 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 HECTD2Q5U5R9 776 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms