RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 SIGLEC16A6NMB1 481 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 PPM1DO15297 605 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 CEACAM5P06731 702 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 CSTF2P33240 577 aaKnown RBP eCLIP12.83□□□□□ -0.36
TMEM54-206ENST00000482771 CASRP41180 1078 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 GPR3P46089 330 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 PAPOLAP51003 745 aaKnown RBP12.83□□□□□ -0.36
TMEM54-206ENST00000482771 FOXK1P85037 733 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 BCL2L1Q07817 233 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 ILF3Q12906 894 aaKnown RBP eCLIP12.83□□□□□ -0.36
TMEM54-206ENST00000482771 TRA2AQ13595 282 aaKnown RBP eCLIP12.83□□□□□ -0.36
TMEM54-206ENST00000482771 NCAPHQ15003 741 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 SLC30A9Q6PML9 568 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 DPPA4Q7L190 304 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 PATE1Q8WXA2 126 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 ASPSCR1Q9BZE9 553 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 SLC39A8Q9C0K1 460 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 LRRC19Q9H756 370 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 OCIAD1Q9NX40 245 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 TUBD1Q9UJT1 453 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 ANAPC2Q9UJX6 822 aa12.83□□□□□ -0.36
TMEM54-206ENST00000482771 ZNF891A8MT65 544 aaPredicted RBP12.82□□□□□ -0.36
TMEM54-206ENST00000482771 CCP110O43303 1012 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 RAD1O60671 282 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 MYCLP1P12525 358 aaPredicted RBP12.82□□□□□ -0.36
TMEM54-206ENST00000482771 UNGP13051 313 aaPredicted RBP12.82□□□□□ -0.36
TMEM54-206ENST00000482771 CR2P20023 1033 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 NSFP46459 744 aaKnown RBP12.82□□□□□ -0.36
TMEM54-206ENST00000482771 GNPDA1P46926 289 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 POLD2P49005 469 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 SCNN1BP51168 640 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 ZNF143P52747 638 aaPredicted RBP12.82□□□□□ -0.36
TMEM54-206ENST00000482771 NDST2P52849 883 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 NSUN2Q08J23 767 aaKnown RBP eCLIP12.82□□□□□ -0.36
TMEM54-206ENST00000482771 NR1D2Q14995 579 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 DENND2CQ68D51 928 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 TRIM72Q6ZMU5 477 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 NRSN1Q8IZ57 195 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 CCDC112Q8NEF3 446 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 OR4D9Q8NGE8 314 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 ECHDC3Q96DC8 303 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 NSMCE3Q96MG7 304 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 CATSPER2Q96P56 530 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 DDA1Q9BW61 102 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 PHPT1Q9NRX4 125 aaPredicted RBP12.82□□□□□ -0.36
TMEM54-206ENST00000482771 TRNAU1APQ9NX07 287 aaKnown RBP12.82□□□□□ -0.36
TMEM54-206ENST00000482771 DONSONQ9NYP3 566 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 SUFUQ9UMX1 484 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 ST14Q9Y5Y6 855 aa12.82□□□□□ -0.36
TMEM54-206ENST00000482771 USP9XQ93008 2570 aaPredicted RBP12.82□□□□□ -0.36
TMEM54-206ENST00000482771 TRBV23OR9-2A0A075B6M9 112 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 IGHV1OR21-1A0A087WYE8 117 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 TTC24A2A3L6 582 aaPredicted RBP12.81□□□□□ -0.36
TMEM54-206ENST00000482771 ARHGAP42A6NI28 874 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 TRAFD1O14545 582 aaPredicted RBP12.81□□□□□ -0.36
TMEM54-206ENST00000482771 CAPN5O15484 640 aaPredicted RBP12.81□□□□□ -0.36
TMEM54-206ENST00000482771 FGF10O15520 208 aaPredicted RBP12.81□□□□□ -0.36
TMEM54-206ENST00000482771 PRKAR1AP10644 381 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 SOX5P35711 763 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 KLK7P49862 253 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 TPI1P60174 286 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 POLR2FP61218 127 aaKnown RBP12.81□□□□□ -0.36
TMEM54-206ENST00000482771 RPL7AP62424 266 aaKnown RBP12.81□□□□□ -0.36
TMEM54-206ENST00000482771 CTBSQ01459 385 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 SQSTM1Q13501 440 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 DCAF12Q5T6F0 453 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 HEATR4Q86WZ0 1026 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 FAM129CQ86XR2 697 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 NAGSQ8N159 534 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 C9orf43Q8TAL5 461 aaPredicted RBP12.81□□□□□ -0.36
TMEM54-206ENST00000482771 PTCD2Q8WV60 388 aaKnown RBP12.81□□□□□ -0.36
TMEM54-206ENST00000482771 COQ10AQ96MF6 247 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 CINPQ9BW66 212 aaPredicted RBP12.81□□□□□ -0.36
TMEM54-206ENST00000482771 TEX101Q9BY14 249 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 VPS16Q9H269 839 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 NLRC4Q9NPP4 1024 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 SAMSN1Q9NSI8 373 aaKnown RBP12.81□□□□□ -0.36
TMEM54-206ENST00000482771 GPATCH2LQ9NWQ4 482 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 KCNK4Q9NYG8 393 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 TMEM9Q9P0T7 183 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 B4GALT6Q9UBX8 382 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 MAN2B2Q9Y2E5 1009 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 PLEKHM1Q9Y4G2 1056 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 LRP4O75096 1905 aa12.81□□□□□ -0.36
TMEM54-206ENST00000482771 ANKRD62A6NC57 917 aa12.8□□□□□ -0.36
TMEM54-206ENST00000482771 EFCAB7A8K855 629 aa12.8□□□□□ -0.36
TMEM54-206ENST00000482771 B4E171 279 aa12.8□□□□□ -0.36
TMEM54-206ENST00000482771 DUX1O43812 170 aa12.8□□□□□ -0.36
TMEM54-206ENST00000482771 CALB1P05937 261 aa12.8□□□□□ -0.36
TMEM54-206ENST00000482771 THRAP10827 490 aa12.8□□□□□ -0.36
TMEM54-206ENST00000482771 ANP32AP39687 249 aaKnown RBP12.8□□□□□ -0.36
TMEM54-206ENST00000482771 ADCY8P40145 1251 aa12.8□□□□□ -0.36
TMEM54-206ENST00000482771 TSPAN7P41732 249 aa12.8□□□□□ -0.36
TMEM54-206ENST00000482771 PPM1FP49593 454 aaPredicted RBP12.8□□□□□ -0.36
TMEM54-206ENST00000482771 CLEC16AQ2KHT3 1053 aa12.8□□□□□ -0.36
TMEM54-206ENST00000482771 C4orf17Q53FE4 359 aa12.8□□□□□ -0.36
TMEM54-206ENST00000482771 SNAP47Q5SQN1 464 aa12.8□□□□□ -0.36
TMEM54-206ENST00000482771 ANKS6Q68DC2 871 aa12.8□□□□□ -0.36
TMEM54-206ENST00000482771 TMEM71Q6P5X7 295 aa12.8□□□□□ -0.36
TMEM54-206ENST00000482771 ARHGAP36Q6ZRI8 547 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms