RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 MTSS1LQ765P7 747 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 NUP54Q7Z3B4 507 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 SLFN11Q7Z7L1 901 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 TTC7BQ86TV6 843 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 ADSSL1Q8N142 457 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 SLC44A3Q8N4M1 653 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 KCTD6Q8NC69 237 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 OR5AN1Q8NGI8 311 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 PPP1R14CQ8TAE6 165 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 GSDMBQ8TAX9 411 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 GDAP1Q8TB36 358 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 ZNF606Q8WXB4 792 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 IFT74Q96LB3 600 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 PAAF1Q9BRP4 392 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 RABEP2Q9H5N1 569 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 RABL2AQ9UBK7 228 aaPredicted RBP6.77□□□□□ -1.33
CLK1-212ENST00000482590 CACNG4Q9UBN1 327 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 AFF4Q9UHB7 1163 aaKnown RBP6.77□□□□□ -1.33
CLK1-212ENST00000482590 SMC3Q9UQE7 1217 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 GDAQ9Y2T3 454 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 NUMBLQ9Y6R0 609 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 CEP250Q9BV73 2442 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 DMXL1Q9Y485 3027 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 PHLPP2Q6ZVD8 1323 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 A0A087WWV3 80 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 PRSS38A1L453 326 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 PTGESO14684 152 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 CCL16O15467 120 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 THAP12O43422 761 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 GJB3O75712 270 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 TK1P04183 234 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 ANXA2P07355 339 aaKnown RBP6.76□□□□□ -1.33
CLK1-212ENST00000482590 MYL4P12829 197 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 PROZP22891 400 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 RPA1P27694 616 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 HOXA9P31269 272 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 PTGS2P35354 604 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 PNLIPRP1P54315 467 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 GUCY1B3Q02153 619 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 ADCY2Q08462 1091 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 EPS8Q12929 822 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 MALLQ13021 153 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 MAMLD1Q13495 774 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 HTR4Q13639 388 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 GLRA4Q5JXX5 417 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 RAB12Q6IQ22 244 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 DCLRE1AQ6PJP8 1040 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 KLHL17Q6TDP4 642 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 CRTC1Q6UUV9 634 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 GRASPQ7Z6J2 395 aaPredicted RBP6.76□□□□□ -1.33
CLK1-212ENST00000482590 CATSPER3Q86XQ3 398 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 FAM184AQ8NB25 1140 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 SPC24Q8NBT2 197 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 MOSPD2Q8NHP6 518 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 UTP15Q8TED0 518 aaKnown RBP6.76□□□□□ -1.33
CLK1-212ENST00000482590 KIFAP3Q92845 792 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 FGF14Q92915 247 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 NMD3Q96D46 503 aaKnown RBP6.76□□□□□ -1.33
CLK1-212ENST00000482590 FAM120BQ96EK7 910 aaKnown RBP6.76□□□□□ -1.33
CLK1-212ENST00000482590 CALML4Q96GE6 196 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 C8orf76Q96K31 380 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 UROC1Q96N76 676 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 MTMR9Q96QG7 549 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 FNBP1Q96RU3 617 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 POLR3CQ9BUI4 534 aaPredicted RBP6.76□□□□□ -1.33
CLK1-212ENST00000482590 ITPAQ9BY32 194 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 RAB34Q9BZG1 259 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 FZD8Q9H461 694 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 ERVMER34-1Q9H9K5 563 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 SEPSECSQ9HD40 501 aaKnown RBP6.76□□□□□ -1.33
CLK1-212ENST00000482590 SH3BGRL2Q9UJC5 107 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 CDH7Q9ULB5 785 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 DCHS1Q96JQ0 3298 aa6.76□□□□□ -1.33
CLK1-212ENST00000482590 HELZP42694 1942 aaKnown RBP6.76□□□□□ -1.33
CLK1-212ENST00000482590 MYO16Q9Y6X6 1858 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 FRYLO94915 3013 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 CCDC78A2IDD5 438 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 HMX3A6NHT5 357 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 ANHXE9PGG2 379 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 H3BUI4 141 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 TMEM189-UBE2V1I3L0A0 370 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 CAPN9O14815 690 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 PIP5K1BO14986 540 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 TRAPPC3O43617 180 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 PRLP01236 227 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 LMNAP02545 664 aaKnown RBP6.75□□□□□ -1.33
CLK1-212ENST00000482590 ATP5BP06576 529 aaKnown RBP6.75□□□□□ -1.33
CLK1-212ENST00000482590 DCNP07585 359 aaKnown RBP6.75□□□□□ -1.33
CLK1-212ENST00000482590 ITGA2BP08514 1039 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 CYP11B2P19099 503 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 ADRA1BP35368 520 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 CCT6AP40227 531 aaKnown RBP6.75□□□□□ -1.33
CLK1-212ENST00000482590 FNTBP49356 437 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 EFNA5P52803 228 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 NTHL1P78549 312 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 SLC6A3Q01959 620 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.75□□□□□ -1.33
CLK1-212ENST00000482590 LRMPQ12912 555 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 STK4Q13043 487 aa6.75□□□□□ -1.33
CLK1-212ENST00000482590 TMED1Q13445 227 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms