RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 CYP2A6P11509 494 aaPredicted RBP10.48□□□□□ -0.73
CPSF4-212ENST00000482251 RPIAP49247 311 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 CCDC173Q0VFZ6 552 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 ARHGEF7Q14155 803 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 IHHQ14623 411 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 PDK2Q15119 407 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 ISXQ2M1V0 245 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 TSR1Q2NL82 804 aaKnown RBP10.48□□□□□ -0.73
CPSF4-212ENST00000482251 LRRC66Q68CR7 880 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 RAET1GQ6H3X3 334 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 PNCKQ6P2M8 343 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 DOK6Q6PKX4 331 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 Q6ZVL8 140 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 USP45Q70EL2 814 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 TAF8Q7Z7C8 310 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 HEATR4Q86WZ0 1026 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 GKN2Q86XP6 184 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 SDR16C5Q8N3Y7 309 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 CCNYQ8ND76 341 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 ATL2Q8NHH9 583 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 CCL4L1Q8NHW4 92 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 SLC35G2Q8TBE7 412 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 PTCD2Q8WV60 388 aaKnown RBP10.48□□□□□ -0.73
CPSF4-212ENST00000482251 GLMNQ92990 594 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 NAT6Q93015 286 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 DTD2Q96FN9 168 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 ATXN7L3BQ96GX2 97 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 TBATAQ96M53 351 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 CCDC42Q96M95 316 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 CEP41Q9BYV8 373 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 POLR1EQ9GZS1 481 aaKnown RBP10.48□□□□□ -0.73
CPSF4-212ENST00000482251 TMEM168Q9H0V1 697 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 NHEJ1Q9H9Q4 299 aaPredicted RBP10.48□□□□□ -0.73
CPSF4-212ENST00000482251 CARS2Q9HA77 564 aaKnown RBP10.48□□□□□ -0.73
CPSF4-212ENST00000482251 RBM22Q9NW64 420 aaKnown RBP eCLIP10.48□□□□□ -0.73
CPSF4-212ENST00000482251 NCKIPSDQ9NZQ3 722 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 PHTF1Q9UMS5 762 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 SATB2Q9UPW6 733 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 CHKBQ9Y259 395 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 URB1O60287 2271 aaKnown RBP10.47□□□□□ -0.73
CPSF4-212ENST00000482251 A0A087WV48 116 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 PRSS38A1L453 326 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 KCNK1O00180 336 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 MYCLP1P12525 358 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-212ENST00000482251 CCNB1P14635 433 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 MAN1A1P33908 653 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 EIF2S3P41091 472 aaKnown RBP10.47□□□□□ -0.73
CPSF4-212ENST00000482251 GNPDA1P46926 289 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 PDX1P52945 283 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 EPHB1P54762 984 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 DYNLT1P63172 113 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 CDK3Q00526 305 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 SLC10A2Q12908 348 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-212ENST00000482251 SPIDRQ14159 915 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 IFI16Q16666 785 aaKnown RBP10.47□□□□□ -0.73
CPSF4-212ENST00000482251 TBC1D25Q3MII6 688 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 TIGD7Q6NT04 549 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-212ENST00000482251 NPNTQ6UXI9 565 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 RBM44Q6ZP01 1051 aaKnown RBP10.47□□□□□ -0.73
CPSF4-212ENST00000482251 B4GALNT4Q76KP1 1039 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 TRIM74Q86UV6 250 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 MAP7D3Q8IWC1 876 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 TEX26Q8N6G2 289 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 Q8N9G6 341 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-212ENST00000482251 FAM46DQ8NEK8 389 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 LPCAT1Q8NF37 534 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-212ENST00000482251 PIH1D2Q8WWB5 315 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 SCG3Q8WXD2 468 aaKnown RBP10.47□□□□□ -0.73
CPSF4-212ENST00000482251 MAML1Q92585 1016 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 FAF2Q96CS3 445 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 ZNF830Q96NB3 372 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-212ENST00000482251 RBM15Q96T37 977 aaKnown RBP eCLIP10.47□□□□□ -0.73
CPSF4-212ENST00000482251 LGMNQ99538 433 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 TDRD1Q9BXT4 1180 aaKnown RBP10.47□□□□□ -0.73
CPSF4-212ENST00000482251 DTLQ9NZJ0 730 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 HEY1Q9Y5J3 304 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 ENTPD2Q9Y5L3 495 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 DGKBQ9Y6T7 804 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 ITPR1Q14643 2758 aa10.47□□□□□ -0.73
CPSF4-212ENST00000482251 NBEAQ8NFP9 2946 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 A0A1W2PNU3 283 aaPredicted RBP10.46□□□□□ -0.73
CPSF4-212ENST00000482251 A0A1W2PQ67 120 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 MATN3O15232 486 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 SLC4A1P02730 911 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 RPLP0P05388 317 aaKnown RBP10.46□□□□□ -0.73
CPSF4-212ENST00000482251 KELP23276 732 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 KDELR1P24390 212 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 NFKBIAP25963 317 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 ACTN2P35609 894 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 TRIM23P36406 574 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 POLD2P49005 469 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 CCL7P80098 99 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 NIPAL4Q0D2K0 466 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 ZBTB17Q13105 803 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 LLGL1Q15334 1064 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 RALGPS1Q5JS13 557 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 LRRC69Q6ZNQ3 347 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 B3GNT8Q7Z7M8 397 aa10.46□□□□□ -0.73
CPSF4-212ENST00000482251 CCDC13Q8IYE1 715 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms