RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 XIRP2A4UGR9 3374 aa10.47□□□□□ -0.73
LINC00173-203ENST00000480237 EML5Q05BV3 1969 aa10.46□□□□□ -0.73
LINC00173-203ENST00000480237 TDRD6O60522 2096 aaKnown RBP10.46□□□□□ -0.73
LINC00173-203ENST00000480237 FAM47DPA6NHR8 397 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 TTC34A8MYJ7 566 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 TNFRSF10AO00220 468 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 CCL22O00626 93 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 PRPF4O43172 522 aaKnown RBP eCLIP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 SLC7A4O43246 635 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 HTRA2O43464 458 aaPredicted RBP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 TIMM44O43615 452 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 FZD6O60353 706 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 POP4O95707 220 aaKnown RBP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 UGT2B4P06133 528 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 F7P08709 466 aaPredicted RBP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 LPOP22079 712 aaPredicted RBP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 ARNTP27540 789 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 GJA4P35212 333 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 MDH1P40925 334 aaKnown RBP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 ABL2P42684 1182 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 SLC1A2P43004 574 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 ARCN1P48444 511 aaKnown RBP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 ZNF140P52738 457 aaPredicted RBP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 MPP1Q00013 466 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 PDE1BQ01064 536 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 MLLT1Q03111 559 aaPredicted RBP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 COL19A1Q14993 1142 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 SEPT7Q16181 437 aaKnown RBP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 ITPRIPL2Q3MIP1 535 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 EMC10Q5UCC4 262 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 DPY19L3Q6ZPD9 716 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 TAX1BP1Q86VP1 789 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 CNTN4Q8IWV2 1026 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 OR13C4Q8NGS5 318 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 UCMAQ8WVF2 138 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 FOXJ1Q92949 421 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 HDAC10Q969S8 669 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 NXPE3Q969Y0 559 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 APOPT1Q96IL0 206 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 SMIM14Q96QK8 99 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 GPR63Q9BZJ6 419 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 IQCGQ9H095 443 aaKnown RBP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 MFSD1Q9H3U5 465 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 BRD9Q9H8M2 597 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 SSU72Q9NP77 194 aaKnown RBP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 PCMTD2Q9NV79 361 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 INTS9Q9NV88 658 aaKnown RBP10.46□□□□□ -0.74
LINC00173-203ENST00000480237 ELOVL2Q9NXB9 296 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 RIMKLBQ9ULI2 386 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 PLA2G4CQ9UP65 541 aa10.46□□□□□ -0.74
LINC00173-203ENST00000480237 CAPN8A6NHC0 703 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 A6NNZ2 444 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 PRRT4C9JH25 899 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 H3BQ06 376 aaPredicted RBP10.45□□□□□ -0.74
LINC00173-203ENST00000480237 TRAFD1O14545 582 aaPredicted RBP10.45□□□□□ -0.74
LINC00173-203ENST00000480237 TPP1O14773 563 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 AURKAO14965 403 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 STX7O15400 261 aaKnown RBP10.45□□□□□ -0.74
LINC00173-203ENST00000480237 ALPIP09923 528 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 SLC8A1P32418 973 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 ABCG1P45844 678 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 SERPINB8P50452 374 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 ARSDP51689 593 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 LIMK2P53671 638 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 ACVR1Q04771 509 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 CTBP1Q13363 440 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 HTR4Q13639 388 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 TUBB8Q3ZCM7 444 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 PREPLQ4J6C6 727 aaPredicted RBP10.45□□□□□ -0.74
LINC00173-203ENST00000480237 NEPROQ6NW34 567 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 AFTPHQ6ULP2 937 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 KIAA0408Q6ZU52 694 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 LYSMD3Q7Z3D4 306 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 PTAR1Q7Z6K3 402 aaPredicted RBP10.45□□□□□ -0.74
LINC00173-203ENST00000480237 DENND6AQ8IWF6 608 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 NDUFAF2Q8N183 169 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 ZNF366Q8N895 744 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 CHST14Q8NCH0 376 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 MDGA1Q8NFP4 955 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 OR4K2Q8NGD2 314 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 CSGALNACT1Q8TDX6 532 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 PIH1D2Q8WWB5 315 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 VPS39Q96JC1 886 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 SERAC1Q96JX3 654 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 TBATAQ96M53 351 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 SRPK1Q96SB4 655 aaKnown RBP10.45□□□□□ -0.74
LINC00173-203ENST00000480237 CPEB1Q9BZB8 566 aaKnown RBP10.45□□□□□ -0.74
LINC00173-203ENST00000480237 RHOJQ9H4E5 214 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 SUV39H2Q9H5I1 410 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 MLXIPLQ9NP71 852 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 CATSPERZQ9NTU4 200 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 NLE1Q9NVX2 485 aaPredicted RBP10.45□□□□□ -0.74
LINC00173-203ENST00000480237 EPS15L1Q9UBC2 864 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 FBXO5Q9UKT4 447 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 PKP3Q9Y446 797 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 NUMBLQ9Y6R0 609 aa10.45□□□□□ -0.74
LINC00173-203ENST00000480237 PLXND1Q9Y4D7 1925 aa10.44□□□□□ -0.74
LINC00173-203ENST00000480237 A0A0J9YYE9 177 aa10.44□□□□□ -0.74
LINC00173-203ENST00000480237 C1orf232A0A0U1RR37 186 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms