RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 RAVER1Q8IY67 606 aaKnown RBP20.5■□□□□ 0.87
VARS-224ENST00000479051 SLC22A18ASQ8N1D0 253 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 FAM71DQ8N9W8 422 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 DTD2Q96FN9 168 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 TRIB3Q96RU7 358 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 GPR27Q9NS67 375 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 GOLGA6AQ9NYA3 693 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 TP53BP1Q12888 1972 aaPredicted RBP20.5■□□□□ 0.87
VARS-224ENST00000479051 LRRK1Q38SD2 2015 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 SPTY2D1-AS1A0A0U1RR47 76 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 DCDC2BA2VCK2 349 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 C5orf60A6NFR6 353 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 F5H423 210 aaPredicted RBP20.49■□□□□ 0.87
VARS-224ENST00000479051 ENC1O14682 589 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 TM4SF5O14894 197 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 LIASO43766 372 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 FGGP02679 453 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 CD59P13987 128 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 CSRP1P21291 193 aaKnown RBP20.49■□□□□ 0.87
VARS-224ENST00000479051 HTR1BP28222 390 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 STIP1P31948 543 aaKnown RBP20.49■□□□□ 0.87
VARS-224ENST00000479051 CXCR5P32302 372 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 ACTN2P35609 894 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 INPP5AQ14642 412 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 LONRF2Q1L5Z9 754 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 KDELC1Q6UW63 502 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 DGLUCYQ7Z3D6 616 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 SLC35F6Q8N357 371 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 IPMKQ8NFU5 416 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 CCDC110Q8TBZ0 833 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 SETD7Q8WTS6 366 aaKnown RBP20.49■□□□□ 0.87
VARS-224ENST00000479051 ATG4AQ8WYN0 398 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 PBKQ96KB5 322 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 TMEM121Q9BTD3 319 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 ZNF148Q9UQR1 794 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 TMEM131Q92545 1883 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 KNL1Q8NG31 2342 aa20.49■□□□□ 0.87
VARS-224ENST00000479051 GOLGA8CPA6NN73 597 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 H3BM21 787 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 ITGAVP06756 1048 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 TSHRP16473 764 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 HLA-DPA1P20036 260 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 PSMB4P28070 264 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 EPHA8P29322 1005 aaPredicted RBP20.48■□□□□ 0.87
VARS-224ENST00000479051 ETV3P41162 512 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 STC1P52823 247 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 IL9RQ01113 521 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 PTPRRQ15256 657 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 P3H1Q32P28 736 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 ESRP1Q6NXG1 681 aaKnown RBP20.48■□□□□ 0.87
VARS-224ENST00000479051 MACC1Q6ZN28 852 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 Q6ZVL8 140 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 NAXDQ8IW45 347 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 NRSN1Q8IZ57 195 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 C1orf54Q8WWF1 131 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 OXNAD1Q96HP4 312 aaPredicted RBP20.48■□□□□ 0.87
VARS-224ENST00000479051 APOOQ9BUR5 198 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 MAGEE1Q9HCI5 957 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 HOMER3Q9NSC5 361 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 DNAJC28Q9NX36 388 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 PKD2L2Q9NZM6 624 aa20.48■□□□□ 0.87
VARS-224ENST00000479051 LOC285095A0A1B0GVY8 99 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 CACNB4O00305 520 aaPredicted RBP20.47■□□□□ 0.87
VARS-224ENST00000479051 PDE2AO00408 941 aaPredicted RBP20.47■□□□□ 0.87
VARS-224ENST00000479051 GCATO75600 419 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 CLDN7O95471 211 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 PYGLP06737 847 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 GM2AP17900 193 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 KCNA4P22459 653 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 KELP23276 732 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 GRK6P43250 576 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 NOVA1P51513 510 aaKnown RBP20.47■□□□□ 0.87
VARS-224ENST00000479051 HNRNPKP61978 463 aaKnown RBP eCLIP20.47■□□□□ 0.87
VARS-224ENST00000479051 PTSQ03393 145 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 FZD2Q14332 565 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 NFATC4Q14934 902 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 CCNG2Q16589 344 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 PARP6Q2NL67 630 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 PNCKQ6P2M8 343 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 ZNF765Q7L2R6 523 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 CBARPQ8N350 705 aaPredicted RBP20.47■□□□□ 0.87
VARS-224ENST00000479051 MRGPRX2Q96LB1 330 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 SMIM14Q96QK8 99 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 NAP1L3Q99457 506 aaPredicted RBP20.47■□□□□ 0.87
VARS-224ENST00000479051 GPR63Q9BZJ6 419 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 WDR26Q9H7D7 661 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 ZFYVE1Q9HBF4 777 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 RAD18Q9NS91 495 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 PYCARDQ9ULZ3 195 aa20.47■□□□□ 0.87
VARS-224ENST00000479051 ASCC3Q8N3C0 2202 aaKnown RBP20.47■□□□□ 0.87
VARS-224ENST00000479051 RGSL1A5PLK6 1076 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 FGF1P05230 155 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 C1SP09871 688 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 DPTQ07507 201 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 OASLQ15646 514 aaKnown RBP20.46■□□□□ 0.87
VARS-224ENST00000479051 SLC1A5Q15758 541 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 RAET1GQ6H3X3 334 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 TECPR1Q7Z6L1 1165 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 PIP4P1Q86T03 277 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 DEFB124Q8NES8 71 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms