RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 LIMK2P53671 638 aa21.27■■□□□ 1
SDF4-206ENST00000478938 C6orf141Q5SZD1 244 aa21.27■■□□□ 1
SDF4-206ENST00000478938 CDR2LQ86X02 465 aaPredicted RBP21.27■■□□□ 1
SDF4-206ENST00000478938 C8orf59Q8N0T1 100 aaPredicted RBP21.27■■□□□ 1
SDF4-206ENST00000478938 GRPEL2Q8TAA5 225 aa21.27■■□□□ 1
SDF4-206ENST00000478938 SLA2Q9H6Q3 261 aa21.27■■□□□ 1
SDF4-206ENST00000478938 ABI2Q9NYB9 513 aaPredicted RBP21.27■■□□□ 1
SDF4-206ENST00000478938 TRPC5OSA6NMA1 111 aa21.27■□□□□ 0.99
SDF4-206ENST00000478938 NDUFB10O96000 172 aa21.27■□□□□ 0.99
SDF4-206ENST00000478938 FCGR1AP12314 374 aa21.27■□□□□ 0.99
SDF4-206ENST00000478938 CES1P23141 567 aa21.27■□□□□ 0.99
SDF4-206ENST00000478938 HTR3AP46098 478 aa21.27■□□□□ 0.99
SDF4-206ENST00000478938 TPD52P55327 224 aaPredicted RBP21.27■□□□□ 0.99
SDF4-206ENST00000478938 ZNF438Q7Z4V0 828 aa21.27■□□□□ 0.99
SDF4-206ENST00000478938 MCFD2Q8NI22 146 aa21.27■□□□□ 0.99
SDF4-206ENST00000478938 PCDH19Q8TAB3 1148 aa21.27■□□□□ 0.99
SDF4-206ENST00000478938 ST6GAL2Q96JF0 529 aa21.27■□□□□ 0.99
SDF4-206ENST00000478938 NECTIN3Q9NQS3 549 aa21.27■□□□□ 0.99
SDF4-206ENST00000478938 A8MX80 341 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 MPOP05164 745 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 TCF3P15923 654 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 SPRP35270 261 aaPredicted RBP21.26■□□□□ 0.99
SDF4-206ENST00000478938 GALNT1Q10472 559 aaPredicted RBP21.26■□□□□ 0.99
SDF4-206ENST00000478938 ZNF544Q6NX49 715 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 SCARA5Q6ZMJ2 495 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 IFNEQ86WN2 208 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 SYTL1Q8IYJ3 562 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 FCRL3Q96P31 734 aaPredicted RBP21.26■□□□□ 0.99
SDF4-206ENST00000478938 NODALQ96S42 347 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 SEPHS2Q99611 448 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 SLC30A3Q99726 388 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 ZNF518BQ9C0D4 1074 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 TOR4AQ9NXH8 423 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 EXTL3O43909 919 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 HNRNPLP14866 589 aaKnown RBP eCLIP21.26■□□□□ 0.99
SDF4-206ENST00000478938 SDE2Q6IQ49 451 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 XYLT1Q86Y38 959 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 FAR1Q8WVX9 515 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 STON2Q8WXE9 905 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 PIK3R3Q92569 461 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 RPL3LQ92901 407 aaKnown RBP21.26■□□□□ 0.99
SDF4-206ENST00000478938 EXD2Q9NVH0 621 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 ACTR3BQ9P1U1 418 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 POLHQ9Y253 713 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 ABCA3Q99758 1704 aa21.26■□□□□ 0.99
SDF4-206ENST00000478938 C9JVG2 144 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 ALOX12P18054 663 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 C1QTNF8P60827 252 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 ITPK1Q13572 414 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 NFIXQ14938 502 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 CNSTQ6PJW8 725 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 SMIM5Q71RC9 77 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 ADAMTSL2Q86TH1 951 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 HID1Q8IV36 788 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 ELMO1Q92556 727 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 SMOC2Q9H3U7 446 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 ZNF639Q9UID6 485 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 ADAM28Q9UKQ2 775 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 CDH5P33151 784 aaPredicted RBP21.25■□□□□ 0.99
SDF4-206ENST00000478938 GRK3P35626 688 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 POU6F2P78424 691 aaPredicted RBP21.25■□□□□ 0.99
SDF4-206ENST00000478938 GBE1Q04446 702 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 POU5F1BQ06416 359 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 DGCR6Q14129 220 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 ZNF598Q86UK7 904 aaKnown RBP21.25■□□□□ 0.99
SDF4-206ENST00000478938 OMDQ99983 421 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 ASPSCR1Q9BZE9 553 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 TNFRSF12AQ9NP84 129 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 CISHQ9NSE2 258 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 CMTM6Q9NX76 183 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 FBXL12Q9NXK8 326 aa21.25■□□□□ 0.99
SDF4-206ENST00000478938 MTF2Q9Y483 593 aaPredicted RBP21.25■□□□□ 0.99
SDF4-206ENST00000478938 DLX3O60479 287 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 SCO1O75880 301 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 CHRM3P20309 590 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 MAP2K4P45985 399 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 ARSFP54793 590 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 EMX1Q04741 257 aaPredicted RBP21.24■□□□□ 0.99
SDF4-206ENST00000478938 CCDC14Q49A88 953 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 YIF1BQ5BJH7 314 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 LAIR2Q6ISS4 152 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 TAF2Q6P1X5 1199 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 HACD2Q6Y1H2 254 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 P2RY8Q86VZ1 359 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 ZNF300Q96RE9 604 aaPredicted RBP21.24■□□□□ 0.99
SDF4-206ENST00000478938 GAD1Q99259 594 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 TOR3AQ9H497 397 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 MAT2BQ9NZL9 334 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 FBXO5Q9UKT4 447 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 SLC39A10Q9ULF5 831 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 CABYRO75952 493 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 TRIM16O95361 564 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 GPIP06744 558 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 THRBP10828 461 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 ITGB5P18084 799 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 AVPR1AP37288 418 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 OLIG2Q13516 323 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 TAS1R3Q7RTX0 852 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 SIAH1Q8IUQ4 282 aa21.24■□□□□ 0.99
SDF4-206ENST00000478938 REXO4Q9GZR2 422 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms