RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 TSEN34Q9BSV6 310 aaKnown RBP14.23□□□□□ -0.13
NPHP4-208ENST00000478423 ROGDIQ9GZN7 287 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 NMUR1Q9HB89 426 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 SPAG4Q9NPE6 437 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 STK39Q9UEW8 545 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 PRDM4Q9UKN5 801 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 AP4S1Q9Y587 144 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 SHOX2O60902 331 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-208ENST00000478423 SLC25A11Q02978 314 aaKnown RBP14.22□□□□□ -0.13
NPHP4-208ENST00000478423 DLG2Q15700 870 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 CTU1Q7Z7A3 348 aaKnown RBP14.22□□□□□ -0.13
NPHP4-208ENST00000478423 ZDHHC13Q8IUH4 622 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 EID3Q8N140 333 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 FBXO30Q8TB52 745 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 GFM2Q969S9 779 aaKnown RBP14.22□□□□□ -0.13
NPHP4-208ENST00000478423 MYOCQ99972 504 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 LRMDAQ9H2I8 198 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 TNKS2Q9H2K2 1166 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 TMCO1Q9UM00 188 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 MTF2Q9Y483 593 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-208ENST00000478423 MYH6P13533 1939 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 ALS2Q96Q42 1657 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 ZNF839A8K0R7 811 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 GRM6O15303 877 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 INSIG1O15503 277 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 EPN2O95208 641 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 ADH1CP00326 375 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 C8AP07357 584 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 CCND3P30281 292 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-208ENST00000478423 NRF1Q16656 503 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 C1orf220Q5T0J3 134 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 CERS6Q6ZMG9 384 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 CYP4Z1Q86W10 505 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 ACTRT2Q8TDY3 377 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 GATA5Q9BWX5 397 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-208ENST00000478423 GLYATL1P3A0A0U1RQE8 302 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 HNF4AP41235 474 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 NUP107P57740 925 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 ADRM1Q16186 407 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 NCBP2-AS2Q69YL0 99 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 KIAA1324Q6UXG2 1013 aaKnown RBP14.22□□□□□ -0.13
NPHP4-208ENST00000478423 RPL10LQ96L21 214 aaKnown RBP14.22□□□□□ -0.13
NPHP4-208ENST00000478423 C7orf26Q96N11 449 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 BRD9Q9H8M2 597 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 GKN1Q9NS71 199 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 KLHL28Q9NXS3 571 aa14.22□□□□□ -0.13
NPHP4-208ENST00000478423 FGFR3P22607 806 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 HPCAL1P37235 193 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 GSSP48637 474 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 TIGD2Q4W5G0 525 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 FBXO48Q5FWF7 155 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 ISLR2Q6UXK2 745 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 ULK2Q8IYT8 1036 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 DCBLD1Q8N8Z6 715 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 KCTD13Q8WZ19 329 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 STARD8Q92502 1023 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 ACAT2Q9BWD1 397 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 EIF2B3Q9NR50 452 aaKnown RBP14.21□□□□□ -0.13
NPHP4-208ENST00000478423 ANAPC2Q9UJX6 822 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 ASF1AQ9Y294 204 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 CDK14O94921 469 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 WDR47O94967 919 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 KCNH1O95259 989 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 FAM163BP0C2L3 166 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 ACRP10323 421 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 HK2P52789 917 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 KLF10Q13118 480 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 XKR6Q5GH73 641 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 NET1Q7Z628 596 aaPredicted RBP14.21□□□□□ -0.13
NPHP4-208ENST00000478423 DHRSXQ8N5I4 330 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 OR8D1Q8WZ84 308 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 SLC28A3Q9HAS3 691 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 KRT84Q9NSB2 600 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.21□□□□□ -0.13
NPHP4-208ENST00000478423 HPGDP15428 266 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 MSX2P35548 267 aaPredicted RBP14.21□□□□□ -0.13
NPHP4-208ENST00000478423 MAPK9P45984 424 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 PTDSS1P48651 473 aaKnown RBP14.21□□□□□ -0.13
NPHP4-208ENST00000478423 VWA5B1Q5TIE3 1220 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 HTATIP2Q9BUP3 242 aa14.21□□□□□ -0.13
NPHP4-208ENST00000478423 FCF1Q9Y324 198 aaKnown RBP14.21□□□□□ -0.13
NPHP4-208ENST00000478423 UGT1A9O60656 530 aa14.21□□□□□ -0.14
NPHP4-208ENST00000478423 PPIDQ08752 370 aaKnown RBP14.21□□□□□ -0.14
NPHP4-208ENST00000478423 DEPDC1Q5TB30 811 aa14.21□□□□□ -0.14
NPHP4-208ENST00000478423 FAM46CQ5VWP2 391 aa14.21□□□□□ -0.14
NPHP4-208ENST00000478423 GCNT7Q6ZNI0 430 aa14.21□□□□□ -0.14
NPHP4-208ENST00000478423 GPR156Q8NFN8 814 aa14.21□□□□□ -0.14
NPHP4-208ENST00000478423 SMOQ99835 787 aa14.21□□□□□ -0.14
NPHP4-208ENST00000478423 UGT1A7Q9HAW7 530 aa14.21□□□□□ -0.14
NPHP4-208ENST00000478423 UGT1A10Q9HAW8 530 aa14.21□□□□□ -0.14
NPHP4-208ENST00000478423 UGT1A8Q9HAW9 530 aa14.21□□□□□ -0.14
NPHP4-208ENST00000478423 TLR6Q9Y2C9 796 aa14.21□□□□□ -0.14
NPHP4-208ENST00000478423 TBC1D30Q9Y2I9 924 aa14.21□□□□□ -0.14
NPHP4-208ENST00000478423 PRAMEF1O95521 474 aa14.2□□□□□ -0.14
NPHP4-208ENST00000478423 CCDC157Q569K6 752 aa14.2□□□□□ -0.14
NPHP4-208ENST00000478423 LDLRAD1Q5T700 205 aa14.2□□□□□ -0.14
NPHP4-208ENST00000478423 TMEM26Q6ZUK4 368 aa14.2□□□□□ -0.14
NPHP4-208ENST00000478423 C10orf53Q8N6V4 93 aa14.2□□□□□ -0.14
NPHP4-208ENST00000478423 BANPQ8N9N5 519 aa14.2□□□□□ -0.14
NPHP4-208ENST00000478423 C9orf16Q9BUW7 83 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms