RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 FILIP1LQ4L180 1135 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 KIAA1614Q5VZ46 1190 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 SPECC1LQ69YQ0 1117 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 TMCO3Q6UWJ1 677 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 POLNQ7Z5Q5 900 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 SPRED1Q7Z699 444 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 JAMLQ86YT9 394 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 PGBD5Q8N414 524 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 KIAA1524Q8TCG1 905 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 CSPG4P5Q96PW8 444 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 NUDCD1Q96RS6 583 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 CCNL2Q96S94 520 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-236ENST00000477477 MGME1Q9BQP7 344 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 DPEP2Q9H4A9 486 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 MRPL47Q9HD33 250 aaKnown RBP11.38□□□□□ -0.59
HDLBP-236ENST00000477477 ETNK2Q9NVF9 386 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 LRIT1Q9P2V4 623 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 MYO1AQ9UBC5 1043 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 PISDQ9UG56 409 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 MOSPD1Q9UJG1 213 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 PCDHGC4Q9Y5F7 938 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 RNF215Q9Y6U7 377 aa11.38□□□□□ -0.59
HDLBP-236ENST00000477477 A0A1B0GTH6 734 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 SMTNL1A8MU46 457 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 NVLO15381 856 aaKnown RBP11.37□□□□□ -0.59
HDLBP-236ENST00000477477 NUDT21O43809 227 aaKnown RBP11.37□□□□□ -0.59
HDLBP-236ENST00000477477 MAFKO60675 156 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 TCF4P15884 667 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 LHCGRP22888 699 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 AMPD1P23109 780 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 TRAF2Q12933 501 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 ARHGEF7Q14155 803 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 KIF26BQ2KJY2 2108 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 BOLA3Q53S33 107 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 HEATR4Q86WZ0 1026 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 SLITRK4Q8IW52 837 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 BBS5Q8N3I7 341 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 GPBAR1Q8TDU6 330 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 PDCD6IPQ8WUM4 868 aaKnown RBP11.37□□□□□ -0.59
HDLBP-236ENST00000477477 HSPH1Q92598 858 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 TMEM159Q96B96 161 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 DTD2Q96FN9 168 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 TEX101Q9BY14 249 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 FRMD8Q9BZ67 464 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-236ENST00000477477 ISCUQ9H1K1 167 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 CARS2Q9HA77 564 aaKnown RBP11.37□□□□□ -0.59
HDLBP-236ENST00000477477 NOD2Q9HC29 1040 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 PHPT1Q9NRX4 125 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-236ENST00000477477 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.37□□□□□ -0.59
HDLBP-236ENST00000477477 KCTD5Q9NXV2 234 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 TMEM63CQ9P1W3 806 aa11.37□□□□□ -0.59
HDLBP-236ENST00000477477 ASH1LQ9NR48 2969 aaKnown RBP11.36□□□□□ -0.59
HDLBP-236ENST00000477477 FLNBO75369 2602 aaKnown RBP11.36□□□□□ -0.59
HDLBP-236ENST00000477477 AHCTF1Q8WYP5 2266 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 NPIPB15A6NHN6 443 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-236ENST00000477477 PSMD11O00231 422 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 EFSO43281 561 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 CEACAM5P06731 702 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 RARAP10276 462 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 LIPCP11150 499 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 CYP2A6P11509 494 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-236ENST00000477477 SKILP12757 684 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 CCNB1P14635 433 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 ITIH1P19827 911 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 NFKBIAP25963 317 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 TEAD1P28347 426 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 ETV5P41161 510 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 ETV3P41162 512 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 MAZP56270 477 aaKnown RBP11.36□□□□□ -0.59
HDLBP-236ENST00000477477 MAXP61244 160 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 CDK3Q00526 305 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 B4GALNT1Q00973 533 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 ILF3Q12906 894 aaKnown RBP eCLIP11.36□□□□□ -0.593e-8■■■■□ 19.5
HDLBP-236ENST00000477477 TGIF1Q15583 401 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 MAP9Q49MG5 647 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 RALGPS1Q5JS13 557 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 DENND2CQ68D51 928 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 TXNRD3NBQ6F5E7 133 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 TMPRSS9Q7Z410 1059 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 ZNF438Q7Z4V0 828 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 HSD11B1LQ7Z5J1 315 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 C17orf82Q86X59 251 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-236ENST00000477477 NRROSQ86YC3 692 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 CBARPQ8N350 705 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-236ENST00000477477 ATPAF2Q8N5M1 289 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 ZDHHC1Q8WTX9 485 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 MED8Q96G25 268 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 NAP1L5Q96NT1 182 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-236ENST00000477477 MCCC1Q96RQ3 725 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-236ENST00000477477 CMKLR1Q99788 373 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 GSDMCQ9BYG8 508 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 SUDS3Q9H7L9 328 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-236ENST00000477477 PCDH18Q9HCL0 1135 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 SPATS2LQ9NUQ6 558 aaKnown RBP11.36□□□□□ -0.59
HDLBP-236ENST00000477477 WDR70Q9NW82 654 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 PHTF1Q9UMS5 762 aa11.36□□□□□ -0.59
HDLBP-236ENST00000477477 COL6A6A6NMZ7 2263 aa11.35□□□□□ -0.59
HDLBP-236ENST00000477477 SETXQ7Z333 2677 aaKnown RBP11.35□□□□□ -0.59
HDLBP-236ENST00000477477 ANKRD36A6QL64 1941 aa11.35□□□□□ -0.59
HDLBP-236ENST00000477477 PRAMEF33A0A0G2JMD5 474 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms