RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 CENPIQ92674 756 aaPredicted RBP16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 KIAA1143Q96AT1 154 aaPredicted RBP16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 TUBGCP5Q96RT8 1024 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 GSDMCQ9BYG8 508 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 UBA2Q9UBT2 640 aaPredicted RBP16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 PLEKHB1Q9UF11 243 aaPredicted RBP16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 CREBBPQ92793 2442 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 CEACAM5P06731 702 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 MMEP08473 750 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 MYCLP1P12525 358 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 MAP4P27816 1152 aaKnown RBP16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 PTPN9P43378 593 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 RGRP47804 291 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 RAPGEF1Q13905 1077 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 AFMIDQ63HM1 303 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 SLC30A9Q6PML9 568 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 NAGSQ8N159 534 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 NTAN1Q96AB6 310 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 RTP4Q96DX8 246 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 DPYSL5Q9BPU6 564 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 EFHD1Q9BUP0 239 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 PDFQ9HBH1 243 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 TRNAU1APQ9NX07 287 aaKnown RBP16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 RWDD2AQ9UIY3 292 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 TP53TG5Q9Y2B4 290 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 ST14Q9Y5Y6 855 aa16.46■□□□□ 0.23
APOBEC3F-203ENST00000476513 KRT7P08729 469 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 NR1D1P20393 614 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 SERPINA4P29622 427 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 GNPDA1P46926 289 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 MLLT10P55197 1068 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 SEPT6Q14141 434 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 ATP1A1-AS1Q5TC04 95 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 TMEM71Q6P5X7 295 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 DPPA4Q7L190 304 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 TIPARPQ7Z3E1 657 aaKnown RBP16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 UMODL1-AS1Q8N2C9 162 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 FAM172AQ8WUF8 416 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 PTCD2Q8WV60 388 aaKnown RBP16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 ECHDC3Q96DC8 303 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 TEFMQ96QE5 360 aaKnown RBP16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 ATP13A3Q9H7F0 1226 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 KCNK4Q9NYG8 393 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 FHOD1Q9Y613 1164 aa16.45■□□□□ 0.22
APOBEC3F-203ENST00000476513 WASH4PA8MWX3 477 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 A8MX80 341 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 J3KR12 359 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 K7EM74 188 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 MTIF2P46199 727 aaKnown RBP16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 CSNK1DP48730 415 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 CTBSQ01459 385 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 ABHD18Q0P651 414 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 ACOX1Q15067 660 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 SLFN11Q7Z7L1 901 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 SRLQ86TD4 932 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 STARD8Q92502 1023 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 CTRCQ99895 268 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 TEX101Q9BY14 249 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 FRMD8Q9BZ67 464 aaPredicted RBP16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 PHPT1Q9NRX4 125 aaPredicted RBP16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 PDP2Q9P2J9 529 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 SUFUQ9UMX1 484 aa16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 UTP20O75691 2785 aaKnown RBP16.44■□□□□ 0.22
APOBEC3F-203ENST00000476513 PRAMEF11O60813 436 aa16.43■□□□□ 0.22
APOBEC3F-203ENST00000476513 TCN2P20062 427 aa16.43■□□□□ 0.22
APOBEC3F-203ENST00000476513 MMP8P22894 467 aa16.43■□□□□ 0.22
APOBEC3F-203ENST00000476513 UQCRFS1P47985 274 aa16.43■□□□□ 0.22
APOBEC3F-203ENST00000476513 MC2RQ01718 297 aa16.43■□□□□ 0.22
APOBEC3F-203ENST00000476513 MC1RQ01726 317 aa16.43■□□□□ 0.22
APOBEC3F-203ENST00000476513 C16orf46Q6P387 395 aa16.43■□□□□ 0.22
APOBEC3F-203ENST00000476513 HEATR4Q86WZ0 1026 aa16.43■□□□□ 0.22
APOBEC3F-203ENST00000476513 TEX19Q8NA77 164 aa16.43■□□□□ 0.22
APOBEC3F-203ENST00000476513 TSEN2Q8NCE0 465 aaKnown RBP16.43■□□□□ 0.22
APOBEC3F-203ENST00000476513 EPS8L1Q8TE68 723 aa16.43■□□□□ 0.22
APOBEC3F-203ENST00000476513 COQ10AQ96MF6 247 aa16.43■□□□□ 0.22
APOBEC3F-203ENST00000476513 CREB3O43889 395 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 AGFG2O95081 481 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 ADCY8P40145 1251 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 GPLD1P80108 840 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 BCL2L1Q07817 233 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 CRTC2Q53ET0 693 aaPredicted RBP16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 SNAP47Q5SQN1 464 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 KLHDC7AQ5VTJ3 777 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 KDELC2Q7Z4H8 507 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 ZNF761Q86XN6 746 aaPredicted RBP16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 PAF1Q8N7H5 531 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 SLC20A1Q8WUM9 679 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 NUS1Q96E22 293 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 C11orf70Q9BRQ4 267 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 NAA15Q9BXJ9 866 aaKnown RBP16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 ZMYND15Q9H091 742 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 LRRC19Q9H756 370 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 CATSPERBQ9H7T0 1116 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 B4GALT6Q9UBX8 382 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 DACH1Q9UI36 760 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 PLEKHM1Q9Y4G2 1056 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 TMEM184BQ9Y519 407 aaPredicted RBP16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 KCNMB2Q9Y691 235 aa16.42■□□□□ 0.22
APOBEC3F-203ENST00000476513 A8MU76 341 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 TRAFD1O14545 582 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms