RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 CTSEP14091 401 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 ITIH1P19827 911 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 CCKBRP32239 447 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 RGRP47804 291 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 BLKP51451 505 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 INHBCP55103 352 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 GSCP56915 257 aaPredicted RBP10.5□□□□□ -0.73
CALD1-217ENST00000475772 JAM2P57087 298 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 YBEYP58557 167 aaPredicted RBP10.5□□□□□ -0.73
CALD1-217ENST00000475772 SRP54P61011 504 aaKnown RBP10.5□□□□□ -0.73
CALD1-217ENST00000475772 SERINC3Q13530 473 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 BECN1Q14457 450 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 NFATC4Q14934 902 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 ELOCQ15369 112 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 TPD52L1Q16890 204 aaPredicted RBP10.5□□□□□ -0.73
CALD1-217ENST00000475772 SLFN11Q7Z7L1 901 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 ZNF677Q86XU0 584 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 PELI3Q8N2H9 469 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 HCAR2Q8TDS4 363 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 CASKIN2Q8WXE0 1202 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 EXOC2Q96KP1 924 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 GFM1Q96RP9 751 aaKnown RBP10.5□□□□□ -0.73
CALD1-217ENST00000475772 RBM15Q96T37 977 aaKnown RBP eCLIP10.5□□□□□ -0.73
CALD1-217ENST00000475772 CLMPQ9H6B4 373 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 SYNDIG1Q9H7V2 258 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 PDFQ9HBH1 243 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 EPB41L5Q9HCM4 733 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 PCDH12Q9NPG4 1184 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 BRD7Q9NPI1 651 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 MRPL40Q9NQ50 206 aaKnown RBP10.5□□□□□ -0.73
CALD1-217ENST00000475772 FZD10Q9ULW2 581 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 GPR34Q9UPC5 381 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 PTPN13Q12923 2485 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 ZFC3H1O60293 1989 aaKnown RBP10.5□□□□□ -0.73
CALD1-217ENST00000475772 NBASA2RRP1 2371 aa10.5□□□□□ -0.73
CALD1-217ENST00000475772 TMEM202A6NGA9 273 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 ZSCAN5CA6NGD5 496 aaPredicted RBP10.49□□□□□ -0.73
CALD1-217ENST00000475772 SIGLEC16A6NMB1 481 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 AGRPO00253 132 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 CCP110O43303 1012 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 B4GAT1O43505 415 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 SLC28A2O43868 658 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 RASGRP1O95267 797 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 IGSF6O95976 241 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 ALPIP09923 528 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 KRT3P12035 628 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 ERCC5P28715 1186 aaPredicted RBP10.49□□□□□ -0.73
CALD1-217ENST00000475772 EPHB2P29323 1055 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 LIG3P49916 1009 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 RHOAP61586 193 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 UBE2HP62256 183 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 NFKB2Q00653 900 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 B4GALNT1Q00973 533 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 RAD51Q06609 339 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 RALGDSQ12967 914 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 EIF3IQ13347 325 aaKnown RBP10.49□□□□□ -0.73
CALD1-217ENST00000475772 TCP11X2Q5H9J9 407 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 GKN2Q86XP6 184 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 DTX1Q86Y01 620 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 CAMK1DQ8IU85 385 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 FAM114A1Q8IWE2 563 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 UMODL1-AS1Q8N2C9 162 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 MSANTD4Q8NCY6 345 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 CCL4L1Q8NHW4 92 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 OR1E3Q8WZA6 343 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 EXTL1Q92935 676 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 PDXPQ96GD0 296 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 LGR4Q9BXB1 951 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 LRRC19Q9H756 370 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 STARD5Q9NSY2 213 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 TAB2Q9NYJ8 693 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 APPL1Q9UKG1 709 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 DAAM1Q9Y4D1 1078 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 DGKBQ9Y6T7 804 aa10.49□□□□□ -0.73
CALD1-217ENST00000475772 PRAMEF33A0A0G2JMD5 474 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 C9orf172C9J069 976 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 NVLO15381 856 aaKnown RBP10.48□□□□□ -0.73
CALD1-217ENST00000475772 CREB3O43889 395 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 PRAMEF10O60809 474 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 TNFP01375 233 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 FUCA1P04066 466 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 PCCBP05166 539 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 GPD1P21695 349 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 SOX5P35711 763 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 TRIM23P36406 574 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 SUOXP51687 545 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 ARSDP51689 593 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 POLR2FP61218 127 aaKnown RBP10.48□□□□□ -0.73
CALD1-217ENST00000475772 RPL7AP62424 266 aaKnown RBP10.48□□□□□ -0.73
CALD1-217ENST00000475772 OGDHQ02218 1023 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 ELP6Q0PNE2 266 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 NFATC3Q12968 1075 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 MTM1Q13496 603 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 HLTFQ14527 1009 aaKnown RBP eCLIP10.48□□□□□ -0.73
CALD1-217ENST00000475772 C16orf46Q6P387 395 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 LIPIQ6XZB0 460 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 ZNF574Q6ZN55 896 aaPredicted RBP10.48□□□□□ -0.73
CALD1-217ENST00000475772 ZFAND4Q86XD8 727 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 ZNF354CQ86Y25 554 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 DNAAF5Q86Y56 855 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms