RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ALG11Q2TAA5 492 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 LRRC66Q68CR7 880 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 ESRP1Q6NXG1 681 aaKnown RBP24.04■■□□□ 1.44
CPNE1-223ENST00000475146 RD3Q7Z3Z2 195 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 TSACCQ96A04 125 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-223ENST00000475146 LRRC61Q9BV99 259 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 HEMGNQ9BXL5 484 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 WDR26Q9H7D7 661 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 KCTD5Q9NXV2 234 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 GOLGA6AQ9NYA3 693 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 PCDHA3Q9Y5H8 950 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 TPRP12270 2363 aaKnown RBP24.04■■□□□ 1.44
CPNE1-223ENST00000475146 GRID2IPA4D2P6 1211 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 CAPN8A6NHC0 703 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 RASGRP1O95267 797 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 PRLP01236 227 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 C1SP09871 688 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 KIAA1024LP59773 190 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 RPL26P61254 145 aaKnown RBP24.03■■□□□ 1.44
CPNE1-223ENST00000475146 DEFB133Q30KQ1 61 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 CCDC181Q5TID7 509 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 PNCKQ6P2M8 343 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 CRTC1Q6UUV9 634 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 Q6ZVL8 140 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 TMPRSS7Q7RTY8 843 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 NT5DC3Q86UY8 548 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 ZC3H18Q86VM9 953 aaKnown RBP24.03■■□□□ 1.44
CPNE1-223ENST00000475146 PELI3Q8N2H9 469 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 GALNT15Q8N3T1 639 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 FUBP1Q96AE4 644 aaKnown RBP24.03■■□□□ 1.44
CPNE1-223ENST00000475146 APOLD1Q96LR9 279 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 RBM15Q96T37 977 aaKnown RBP eCLIP24.03■■□□□ 1.443e-7■■■□□ 15.1
CPNE1-223ENST00000475146 TRIM10Q9UDY6 481 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 DNPEPQ9ULA0 475 aa24.03■■□□□ 1.44
CPNE1-223ENST00000475146 RPL26L1Q9UNX3 145 aaKnown RBP24.03■■□□□ 1.44
CPNE1-223ENST00000475146 CCDC66A2RUB6 948 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 CDK4P11802 303 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 CTSEP14091 401 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 KELP23276 732 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 ACP1P24666 158 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 CTNNA2P26232 953 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 HK3P52790 923 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 GSDMDP57764 484 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 SRP54P61011 504 aaKnown RBP24.02■■□□□ 1.44
CPNE1-223ENST00000475146 TCEA2Q15560 299 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 BBS12Q6ZW61 710 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 LRRC57Q8N9N7 239 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 GATA6Q92908 595 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 TBATAQ96M53 351 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 EVA1BQ9NVM1 165 aa24.02■■□□□ 1.44
CPNE1-223ENST00000475146 A0A0U1RQJ8 604 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 FAM221BA6H8Z2 402 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 GCATO75600 419 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 ANXA6P08133 673 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 MYF5P13349 255 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 TSHRP16473 764 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 ZNF30P17039 623 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 PTPN3P26045 913 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 RWDD2BP57060 319 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 COPS2P61201 443 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 ILKQ13418 452 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 TEX44Q53QW1 395 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 RAET1GQ6H3X3 334 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 ZCCHC8Q6NZY4 707 aaKnown RBP24.01■■□□□ 1.43
CPNE1-223ENST00000475146 NYAP1Q6ZVC0 841 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 CBARPQ8N350 705 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-223ENST00000475146 OR56A4Q8NGH8 313 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 IMP4Q96G21 291 aaKnown RBP24.01■■□□□ 1.43
CPNE1-223ENST00000475146 PDXPQ96GD0 296 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 TMEM121BQ9BXQ6 578 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-223ENST00000475146 ADGRE3Q9BY15 652 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 SLC25A51Q9H1U9 297 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 GLOD4Q9HC38 313 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 PHPT1Q9NRX4 125 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-223ENST00000475146 DOLKQ9UPQ8 538 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 ACACBO00763 2458 aa24.01■■□□□ 1.43
CPNE1-223ENST00000475146 FAM149AA5PLN7 773 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 TMEM202A6NGA9 273 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 TPP1O14773 563 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 MTSS1O43312 755 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 TNFP01375 233 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 CKMT1AP12532 417 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 TRIM23P36406 574 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 CETN2P41208 172 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 GALNT3Q14435 633 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 SMAD1Q15797 465 aaKnown RBP24■■□□□ 1.43
CPNE1-223ENST00000475146 PCSK7Q16549 785 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 QPCTQ16769 361 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 CCNI2Q6ZMN8 369 aaPredicted RBP24■■□□□ 1.43
CPNE1-223ENST00000475146 PEX26Q7Z412 305 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 KDELC2Q7Z4H8 507 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 HEATR4Q86WZ0 1026 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 SYCE1Q8N0S2 351 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 FSTL5Q8N475 847 aaPredicted RBP24■■□□□ 1.43
CPNE1-223ENST00000475146 FAM181AQ8N9Y4 354 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 QKIQ96PU8 341 aaKnown RBP eCLIP24■■□□□ 1.43
CPNE1-223ENST00000475146 LGR4Q9BXB1 951 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 FGF22Q9HCT0 170 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 CD84Q9UIB8 345 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 MOSPD1Q9UJG1 213 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms