RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 NLRP8Q86W28 1048 aa20.49■□□□□ 0.87
SNX13-206ENST00000474067 NRSN1Q8IZ57 195 aa20.49■□□□□ 0.87
SNX13-206ENST00000474067 RBM41Q96IZ5 413 aaKnown RBP20.49■□□□□ 0.87
SNX13-206ENST00000474067 RBM15Q96T37 977 aaKnown RBP eCLIP20.49■□□□□ 0.874e-7■■□□□ 11.6
SNX13-206ENST00000474067 PCDH9Q9HC56 1237 aa20.49■□□□□ 0.87
SNX13-206ENST00000474067 CPED1A4D0V7 1026 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 GOLGA6CA6NDK9 693 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 GOLGA6BA6NDN3 693 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 CAPN8A6NHC0 703 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 A8MX80 341 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 YY2O15391 372 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 GOLGA6DP0CG33 693 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 TGM2P21980 687 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 CETN2P41208 172 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 ZNF75DP51815 510 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 RTP5Q14D33 572 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 SLC14A2Q15849 920 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 CDKN3Q16667 212 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 TFDP3Q5H9I0 405 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 RAET1GQ6H3X3 334 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 C11orf63Q6NUN7 778 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 PLD5Q8N7P1 536 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 KIAA1524Q8TCG1 905 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 PIH1D2Q8WWB5 315 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 TSACCQ96A04 125 aaPredicted RBP20.48■□□□□ 0.87
SNX13-206ENST00000474067 FUBP1Q96AE4 644 aaKnown RBP20.48■□□□□ 0.87
SNX13-206ENST00000474067 GOLGA6AQ9NYA3 693 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 PCDHA13Q9Y5I0 950 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 PLXNB3Q9ULL4 1909 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 LRRK1Q38SD2 2015 aa20.48■□□□□ 0.87
SNX13-206ENST00000474067 CHD8Q9HCK8 2581 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 MAP1BP46821 2468 aaKnown RBP20.47■□□□□ 0.87
SNX13-206ENST00000474067 TTC24A2A3L6 582 aaPredicted RBP20.47■□□□□ 0.87
SNX13-206ENST00000474067 RGSL1A5PLK6 1076 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 NPIPB15A6NHN6 443 aaPredicted RBP20.47■□□□□ 0.87
SNX13-206ENST00000474067 ZNF189O75820 626 aaPredicted RBP20.47■□□□□ 0.87
SNX13-206ENST00000474067 ZRANB2O95218 330 aaKnown RBP eCLIP20.47■□□□□ 0.87
SNX13-206ENST00000474067 MAP3K6O95382 1288 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 JCHAINP01591 159 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 HLA-DQB2P05538 268 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 GPR1P46091 355 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 SEMG2Q02383 582 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 DSC2Q02487 901 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 ILF3Q12906 894 aaKnown RBP eCLIP20.47■□□□□ 0.87
SNX13-206ENST00000474067 C1orf61Q13536 156 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 EFL1Q7Z2Z2 1120 aaKnown RBP20.47■□□□□ 0.87
SNX13-206ENST00000474067 RCOR2Q8IZ40 523 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 RNF25Q96BH1 459 aaPredicted RBP20.47■□□□□ 0.87
SNX13-206ENST00000474067 LYSMD1Q96S90 227 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 TEX101Q9BY14 249 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 GSDMCQ9BYG8 508 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 CDH19Q9H159 772 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 RAD18Q9NS91 495 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 MOSPD1Q9UJG1 213 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 PADI4Q9UM07 663 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 GPR34Q9UPC5 381 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 ALG6Q9Y672 507 aa20.47■□□□□ 0.87
SNX13-206ENST00000474067 ARID1BQ8NFD5 2236 aaPredicted RBP20.47■□□□□ 0.87
SNX13-206ENST00000474067 PRSS38A1L453 326 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 TMX2-CTNND1H3BSU7 103 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 GCATO75600 419 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 TNNT1P13805 278 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 CYP4F3Q08477 520 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 LRRC66Q68CR7 880 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 TAF8Q7Z7C8 310 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 DAAM2Q86T65 1068 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 NT5DC3Q86UY8 548 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 HEATR4Q86WZ0 1026 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 PLA2G15Q8NCC3 412 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 MDM1Q8TC05 714 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 P3H4Q92791 437 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 AP2M1Q96CW1 435 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 VAT1Q99536 393 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 LGMNQ99538 433 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 MLPHQ9BV36 600 aaPredicted RBP20.46■□□□□ 0.87
SNX13-206ENST00000474067 PKD2L2Q9NZM6 624 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 CHKBQ9Y259 395 aa20.46■□□□□ 0.87
SNX13-206ENST00000474067 C3orf70A6NLC5 250 aaPredicted RBP20.45■□□□□ 0.86
SNX13-206ENST00000474067 KCNK1O00180 336 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 RRP8O43159 456 aaKnown RBP20.45■□□□□ 0.86
SNX13-206ENST00000474067 NDUFA10O95299 355 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 CAPNS1P04632 268 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 CTPS1P17812 591 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 LHCGRP22888 699 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 ACTN2P35609 894 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 ETV3P41162 512 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 NAP1L1P55209 391 aaKnown RBP20.45■□□□□ 0.86
SNX13-206ENST00000474067 COPS2P61201 443 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 SLC10A2Q12908 348 aaPredicted RBP20.45■□□□□ 0.86
SNX13-206ENST00000474067 CDCP2Q5VXM1 449 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 KDM7AQ6ZMT4 941 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 RBM44Q6ZP01 1051 aaKnown RBP20.45■□□□□ 0.86
SNX13-206ENST00000474067 CPNE8Q86YQ8 564 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 CCDC50Q8IVM0 306 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 KATNAL2Q8IYT4 538 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 CBARPQ8N350 705 aaPredicted RBP20.45■□□□□ 0.86
SNX13-206ENST00000474067 LPCAT1Q8NF37 534 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 ARRDC2Q8TBH0 407 aa20.45■□□□□ 0.86
SNX13-206ENST00000474067 TFB1MQ8WVM0 346 aaKnown RBP20.45■□□□□ 0.86
SNX13-206ENST00000474067 PDXPQ96GD0 296 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms