RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.56□□□□□ -0.44e-6■■■■□ 24.2
TRAPPC12-217ENST00000473348 EBNA1BP2Q99848 306 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-217ENST00000473348 TRIM56Q9BRZ2 755 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-217ENST00000473348 MRM3Q9HC36 420 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-217ENST00000473348 SOX13Q9UN79 622 aa12.56□□□□□ -0.4
TRAPPC12-217ENST00000473348 PRR23AA6NEV1 266 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 MROH6A6NGR9 719 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 C2orf81A6NN90 581 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 H0Y858 1186 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 AXIN1O15169 862 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 STX7O15400 261 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 ZNF217O75362 1048 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 PCDH8O95206 1070 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 TDGF1P13385 188 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 C6P13671 934 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 PGAM1P18669 254 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 LPOP22079 712 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 ACSL1P33121 698 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 HMGCLP35914 325 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 MAGEA4P43358 317 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 LIG3P49916 1009 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 ZNF140P52738 457 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 PDE1BQ01064 536 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 DMWDQ09019 674 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 PTPRCAPQ14761 206 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 TSTD2Q5T7W7 516 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 CES3Q6UWW8 571 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 NLRP9Q7RTR0 991 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 HSD11B1LQ7Z5J1 315 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 TMC3Q7Z5M5 1100 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 IGDCC3Q8IVU1 814 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 C1orf210Q8IVY1 113 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 OR4K2Q8NGD2 314 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 RLN3Q8WXF3 142 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 ZNF669Q96BR6 464 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 EID2BQ96D98 161 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 CFAP36Q96G28 342 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 C9orf72Q96LT7 481 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 NAT9Q9BTE0 207 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 KIFC1Q9BW19 673 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 BTBD1Q9H0C5 482 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 SGK2Q9HBY8 427 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 PREBQ9HCU5 417 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 C11orf16Q9NQ32 467 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 CHRAC1Q9NRG0 131 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 IL17CQ9P0M4 197 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 ZC3H7BQ9UGR2 993 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 PKP3Q9Y446 797 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 KCTD3Q9Y597 815 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 RPS6KL1Q9Y6S9 549 aa12.55□□□□□ -0.4
TRAPPC12-217ENST00000473348 LRP4O75096 1905 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 CUL9Q8IWT3 2517 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 TBC1D3DA0A087WVF3 549 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 TBC1D3IA0A087WXS9 549 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 TBC1D3EA0A087X179 549 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 TBC1D3KA0A087X1G2 549 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 IGHV1OR15-9A0A0B4J2B8 117 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 FAM237BA0A1B0GVD1 139 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 MAGEB16A2A368 324 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 TBC1D3FA6NER0 549 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 FAM47DPA6NHR8 397 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 LRRC72A6NJI9 287 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 TBC1D3LB9A6J9 549 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 PSMD11O00231 422 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 MMP20O60882 483 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 RNGTTO60942 597 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 SEMA4FO95754 770 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 TBC1D3HP0C7X1 549 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 NMBRP28336 390 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 CD6P30203 668 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 AVPR2P30518 371 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 OXTRP30559 389 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 HOXA6P31267 233 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 TMPRSS15P98073 1019 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 PTSQ03393 145 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 SLMAPQ14BN4 828 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 ACOX1Q15067 660 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 MAP7D1Q3KQU3 841 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 SEL1L3Q68CR1 1132 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 TBC1D3GQ6DHY5 549 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 TBC1D3CQ6IPX1 549 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 KIAA1161Q6NSJ0 714 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 EMBQ6PCB8 327 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 CCNJLQ8IV13 435 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 MAML2Q8IZL2 1156 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 TBC1D3Q8IZP1 549 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 FAM160A2Q8N612 972 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 OR13C4Q8NGS5 318 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 OR2T34Q8NGX1 318 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 AENQ8WTP8 325 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 PYROXD1Q8WU10 500 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 STYXQ8WUJ0 223 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 MFSD3Q96ES6 412 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 TOE1Q96GM8 510 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 DNAJC1Q96KC8 554 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 ZNF778Q96MU6 729 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 CDC42EP4Q9H3Q1 356 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 KDM4CQ9H3R0 1056 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 BPIFA1Q9NP55 256 aa12.54□□□□□ -0.4
TRAPPC12-217ENST00000473348 PKD2L2Q9NZM6 624 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms