RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 PTPRRQ15256 657 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 C6orf132Q5T0Z8 1188 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 NPNTQ6UXI9 565 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 RD3Q7Z3Z2 195 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 HSD11B1LQ7Z5J1 315 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 TSPAN33Q86UF1 283 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 PROSER1Q86XN7 944 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 CACTIN-AS1Q8N1I8 211 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 PELI3Q8N2H9 469 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 OR56A4Q8NGH8 313 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 MDM1Q8TC05 714 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 IFI44Q8TCB0 444 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 GLMNQ92990 594 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 OLFM3Q96PB7 478 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 BOCQ9BWV1 1114 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 TFR2Q9UP52 801 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 DOLKQ9UPQ8 538 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 ZZEF1O43149 2961 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 A0A0J9YYE9 177 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 SRRM3A6NNA2 597 aaPredicted RBP22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 PPP1R12AO14974 1030 aaPredicted RBP22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 YY2O15391 372 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 TNFP01375 233 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 TRBC1P01850 177 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 CELA2BP08218 269 aaPredicted RBP22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 ETV3P41162 512 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 DYNLT1P63172 113 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 AP1B1Q10567 949 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 ZBTB17Q13105 803 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 TARDBPQ13148 414 aaKnown RBP eCLIP22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 NR0B2Q15466 257 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 CDKN3Q16667 212 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 NYAP1Q6ZVC0 841 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 TMTC1Q8IUR5 882 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 SDR16C5Q8N3Y7 309 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 PDXPQ96GD0 296 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 GOLPH3Q9H4A6 298 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 DKK4Q9UBT3 224 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 DNPEPQ9ULA0 475 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 CLCA2Q9UQC9 943 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 CHKBQ9Y259 395 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 DGKBQ9Y6T7 804 aa22.55■■□□□ 1.2
PTP4A1-203ENST00000473334 TMEM202A6NGA9 273 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 SOWAHDA6NJG2 315 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 PDE2AO00408 941 aaPredicted RBP22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 TNFRSF10CO14798 259 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 OPA1O60313 960 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 NDUFA10O95299 355 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 ZNF30P17039 623 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 CDKN2BP42772 138 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 RPIAP49247 311 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 TAZQ16635 292 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 C11orf63Q6NUN7 778 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 LVRNQ6Q4G3 990 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 CRTC1Q6UUV9 634 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 Q6ZVL8 140 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 GKN2Q86XP6 184 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 SLC35F3Q8IY50 421 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 CNTD1Q8N815 330 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 SCG3Q8WXD2 468 aaKnown RBP22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 OR1E3Q8WZA6 343 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 LGR4Q9BXB1 951 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 BRD8Q9H0E9 1235 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 PCDH9Q9HC56 1237 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 FGF22Q9HCT0 170 aa22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 EPN1Q9Y6I3 576 aaPredicted RBP22.54■■□□□ 1.2
PTP4A1-203ENST00000473334 KNTC1P50748 2209 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 EME2A4GXA9 379 aaPredicted RBP22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 CAPN8A6NHC0 703 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 TAF4O00268 1085 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 IPO7O95373 1038 aaKnown RBP22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 PRLP01236 227 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 MMP2P08253 660 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 MYCLP1P12525 358 aaPredicted RBP22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 CD86P42081 329 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 RPL26P61254 145 aaKnown RBP22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 TFDP2Q14188 446 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 LRRC66Q68CR7 880 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 KCTD16Q68DU8 428 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 GUSBP11Q6P575 273 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 SPOCD1Q6ZMY3 1216 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 TECPR1Q7Z6L1 1165 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 DCBLD1Q8N8Z6 715 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 LPCAT1Q8NF37 534 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 NXPE2Q96DL1 559 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 SMIM14Q96QK8 99 aa22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 RBM15Q96T37 977 aaKnown RBP eCLIP22.53■■□□□ 1.28e-7■■■□□ 15.7
PTP4A1-203ENST00000473334 PHPT1Q9NRX4 125 aaPredicted RBP22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 RPL26L1Q9UNX3 145 aaKnown RBP22.53■■□□□ 1.2
PTP4A1-203ENST00000473334 A0A0U1RQS6 177 aa22.52■■□□□ 1.2
PTP4A1-203ENST00000473334 CPED1A4D0V7 1026 aa22.52■■□□□ 1.2
PTP4A1-203ENST00000473334 MT-CO3P00414 261 aa22.52■■□□□ 1.2
PTP4A1-203ENST00000473334 TEAD1P28347 426 aa22.52■■□□□ 1.2
PTP4A1-203ENST00000473334 NR2C2P49116 596 aa22.52■■□□□ 1.2
PTP4A1-203ENST00000473334 SKOR1P84550 965 aa22.52■■□□□ 1.2
PTP4A1-203ENST00000473334 DPTQ07507 201 aa22.52■■□□□ 1.2
PTP4A1-203ENST00000473334 CYP4F3Q08477 520 aa22.52■■□□□ 1.2
PTP4A1-203ENST00000473334 TCEA2Q15560 299 aa22.52■■□□□ 1.2
PTP4A1-203ENST00000473334 RAET1GQ6H3X3 334 aa22.52■■□□□ 1.2
PTP4A1-203ENST00000473334 BZW1Q7L1Q6 419 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms