RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 C16orf52Q8NHV5 167 aa4.15□□□□□ -1.75
PRPF3-204ENST00000470824 LPAR1Q92633 364 aa4.15□□□□□ -1.75
PRPF3-204ENST00000470824 MOAP1Q96BY2 351 aa4.15□□□□□ -1.75
PRPF3-204ENST00000470824 RRNAD1Q96FB5 475 aaKnown RBP4.15□□□□□ -1.75
PRPF3-204ENST00000470824 C1QTNF1Q9BXJ1 281 aa4.15□□□□□ -1.75
PRPF3-204ENST00000470824 ISCUQ9H1K1 167 aa4.15□□□□□ -1.75
PRPF3-204ENST00000470824 SLC28A3Q9HAS3 691 aa4.15□□□□□ -1.75
PRPF3-204ENST00000470824 GPR108Q9NPR9 543 aa4.15□□□□□ -1.75
PRPF3-204ENST00000470824 SETD4Q9NVD3 440 aa4.15□□□□□ -1.75
PRPF3-204ENST00000470824 CISD1Q9NZ45 108 aaKnown RBP4.15□□□□□ -1.75
PRPF3-204ENST00000470824 NFKBIL1Q9UBC1 381 aaPredicted RBP4.15□□□□□ -1.75
PRPF3-204ENST00000470824 HEY2Q9UBP5 337 aa4.15□□□□□ -1.75
PRPF3-204ENST00000470824 R3HDM2Q9Y2K5 976 aaKnown RBP4.15□□□□□ -1.75
PRPF3-204ENST00000470824 SRPRBQ9Y5M8 271 aaKnown RBP4.15□□□□□ -1.75
PRPF3-204ENST00000470824 HS3ST3B1Q9Y662 390 aa4.15□□□□□ -1.75
PRPF3-204ENST00000470824 NESP48681 1621 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 TMEM272A0A1B0GTI8 110 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 KDM4EB2RXH2 506 aaPredicted RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 MASP2O00187 686 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 TPPPO94811 219 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 FGBP02675 491 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 HIST1H2ABP04908 130 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 HIST1H2ADP20671 130 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 PON1P27169 355 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 CD38P28907 300 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 MMP13P45452 471 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 ME1P48163 572 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 HSD17B4P51659 736 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 ZP1P60852 638 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 PSMC6P62333 389 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 MRPS5P82675 430 aaKnown RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 ADORA2A-AS1P86434 159 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 PRPF4BQ13523 1007 aaKnown RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 PCLAFQ15004 111 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 RBMS2Q15434 407 aaKnown RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 EZH2Q15910 746 aaKnown RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 BMP2KLQ5H9B9 411 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 MTX3Q5HYI7 312 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 GARNL3Q5VVW2 1013 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 DCAF12L2Q5VW00 463 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 MORN5Q5VZ52 161 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 PDXDC1Q6P996 788 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 SHC4Q6S5L8 630 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 CFAP77Q6ZQR2 320 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 HIST3H2AQ7L7L0 130 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 ADGRA1Q86SQ6 560 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 MMP21Q8N119 569 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 TMTC2Q8N394 836 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 ARFGAP1Q8N6T3 406 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 CCDC191Q8NCU4 936 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 AGBL3Q8NEM8 1001 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 GPT2Q8TD30 523 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 PRPF31Q8WWY3 499 aaKnown RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 INPP5DQ92835 1189 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 IGSF8Q969P0 613 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 SLC22A18Q96BI1 424 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 SRSF8Q9BRL6 282 aaKnown RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 NDST4Q9H3R1 872 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 OSGEPL1Q9H4B0 414 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 CATSPERBQ9H7T0 1116 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 MKKSQ9NPJ1 570 aaPredicted RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 HINT3Q9NQE9 182 aaKnown RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 SIRT3Q9NTG7 399 aaPredicted RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 TRNAU1APQ9NX07 287 aaKnown RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 CWC15Q9P013 229 aaKnown RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 CFDP1Q9UEE9 299 aaPredicted RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 SEC63Q9UGP8 760 aaKnown RBP4.14□□□□□ -1.75
PRPF3-204ENST00000470824 CMAHPQ9Y471 501 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 STON1Q9Y6Q2 735 aa4.14□□□□□ -1.75
PRPF3-204ENST00000470824 SMARCA4P51532 1647 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 HMGXB3Q12766 1538 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 C1orf226A1L170 272 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 OR2A25A4D2G3 310 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 LRRC72A6NJI9 287 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 CGB1A6NKQ9 187 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 MS4A18H0YCH9 400 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 DKC1O60832 514 aaKnown RBP eCLIP4.13□□□□□ -1.75
PRPF3-204ENST00000470824 CSPG5O95196 566 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 EPN2O95208 641 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 ARSBP15848 533 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 GNLYP22749 145 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 TBXAS1P24557 533 aaPredicted RBP4.13□□□□□ -1.75
PRPF3-204ENST00000470824 PRCPP42785 496 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 ENTPD1P49961 510 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 METAP2P50579 478 aaKnown RBP eCLIP4.13□□□□□ -1.75
PRPF3-204ENST00000470824 RAD23BP54727 409 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 P2RX3P56373 397 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 INHBEP58166 350 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 TAS2R40P59535 323 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 SRSF1Q07955 248 aaKnown RBP eCLIP4.13□□□□□ -1.75
PRPF3-204ENST00000470824 LAMB3Q13751 1172 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 PTGR1Q14914 329 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 CCDC96Q2M329 555 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 TMEM266Q2M3C6 531 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 PXDC1Q5TGL8 231 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 NUGGCQ68CJ6 796 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 ZNF626Q68DY1 528 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 HIST2H2BCQ6DN03 193 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 HIST2H2BDQ6DRA6 164 aa4.13□□□□□ -1.75
PRPF3-204ENST00000470824 SIGIRRQ6IA17 410 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms