RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 A8MX80 341 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 C9orf172C9J069 976 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 EPHB6O15197 1021 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 CCDC172P0C7W6 258 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 MYCLP1P12525 358 aaPredicted RBP13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 SCNN1BP51168 640 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 MAZP56270 477 aaKnown RBP13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 OR1D5P58170 312 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 AP1S1P61966 158 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 NFKB2Q00653 900 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 B4GALNT1Q00973 533 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 NSUN2Q08J23 767 aaKnown RBP eCLIP13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 C16orf72Q14CZ0 275 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 PPP1R2P3Q6NXS1 205 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 DTX1Q86Y01 620 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 SFTPA2Q8IWL1 248 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 CCL4L1Q8NHW4 92 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 ECHDC3Q96DC8 303 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 ZMYND15Q9H091 742 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 RDH14Q9HBH5 336 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 SEPT3Q9UH03 358 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 NAV2Q8IVL1 2488 aa13.89□□□□□ -0.19
SEMA3F-208ENST00000470737 HECTD1Q9ULT8 2610 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 TCRBV5S1A1TA0A578 114 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 GOLGA6CA6NDK9 693 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 GOLGA6BA6NDN3 693 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 SMTNL1A8MU46 457 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 TERTO14746 1132 aaKnown RBP13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 HGSO14964 777 aaPredicted RBP13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 GOLGA6DP0CG33 693 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 ITGB6P18564 788 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 PSMA2P25787 234 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 PPM1FP49593 454 aaPredicted RBP13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 IL10RBQ08334 325 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 ZNF235Q14590 738 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 ANO6Q4KMQ2 910 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 ERMARDQ5T6L9 678 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 DENND2CQ68D51 928 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 ACAD10Q6JQN1 1059 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 TMPRSS9Q7Z410 1059 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 MCOLN2Q8IZK6 566 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 IL22RA1Q8N6P7 574 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 GPBAR1Q8TDU6 330 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 PDCD6IPQ8WUM4 868 aaKnown RBP13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 TAAR9Q96RI9 348 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 LGR4Q9BXB1 951 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 HSD3B7Q9H2F3 369 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 SPATS2LQ9NUQ6 558 aaKnown RBP13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 TRNAU1APQ9NX07 287 aaKnown RBP13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 GOLGA6AQ9NYA3 693 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 TAAR2Q9P1P5 351 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 B4GALT6Q9UBX8 382 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 SIK3Q9Y2K2 1263 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 TLN1Q9Y490 2541 aaKnown RBP13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 SDK2Q58EX2 2172 aa13.88□□□□□ -0.19
SEMA3F-208ENST00000470737 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 SUV39H1O43463 412 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 B4GAT1O43505 415 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 RNF8O76064 485 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 CYP2A6P11509 494 aaPredicted RBP13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 ERCC2P18074 760 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 VIPR1P32241 457 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 CSTF2P33240 577 aaKnown RBP eCLIP13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 GPR3P46089 330 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 GNPDA1P46926 289 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 COPB1P53618 953 aaKnown RBP13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 CYP4F2P78329 520 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 UBXN1Q04323 297 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 TRA2AQ13595 282 aaKnown RBP eCLIP13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 LBRQ14739 615 aaKnown RBP13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 PPP6R3Q5H9R7 873 aaPredicted RBP13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 PPP1R15BQ5SWA1 713 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 TMCO4Q5TGY1 634 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 RFX8Q6ZV50 586 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 APTXQ7Z2E3 356 aaKnown RBP13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 ZNF438Q7Z4V0 828 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 HEATR4Q86WZ0 1026 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 BBS5Q8N3I7 341 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 RCBTB1Q8NDN9 531 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 JPH3Q8WXH2 748 aaPredicted RBP13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 CCDC74BQ96LY2 380 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 DPYSL5Q9BPU6 564 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 NUDT22Q9BRQ3 303 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 SLC25A18Q9H1K4 315 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 PARVAQ9NVD7 372 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 GEMIN8Q9NWZ8 242 aaKnown RBP13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 PCSK1NQ9UHG2 260 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 BOD1L1Q8NFC6 3051 aa13.87□□□□□ -0.19
SEMA3F-208ENST00000470737 BSNQ9UPA5 3926 aa13.86□□□□□ -0.19
SEMA3F-208ENST00000470737 IGHV5-10-1A0A0J9YXX1 117 aa13.86□□□□□ -0.19
SEMA3F-208ENST00000470737 TRAFD1O14545 582 aaPredicted RBP13.86□□□□□ -0.19
SEMA3F-208ENST00000470737 PRPSAP2O60256 369 aa13.86□□□□□ -0.19
SEMA3F-208ENST00000470737 ECEL1O95672 775 aa13.86□□□□□ -0.19
SEMA3F-208ENST00000470737 CPP00450 1065 aa13.86□□□□□ -0.19
SEMA3F-208ENST00000470737 FGF1P05230 155 aa13.86□□□□□ -0.19
SEMA3F-208ENST00000470737 CCL4P13236 92 aa13.86□□□□□ -0.19
SEMA3F-208ENST00000470737 FERP16591 822 aa13.86□□□□□ -0.19
SEMA3F-208ENST00000470737 GM2AP17900 193 aa13.86□□□□□ -0.19
SEMA3F-208ENST00000470737 TNFAIP3P21580 790 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms