RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 MYL6P60660 151 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 DYRK1AQ13627 763 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 LONRF1Q17RB8 773 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 ZACNQ401N2 412 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 ARMC6Q6NXE6 501 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 CAVIN1Q6NZI2 390 aaKnown RBP6.52□□□□□ -1.37
PTCD3-208ENST00000469585 VSTM1Q6UX27 236 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 RHOUQ7L0Q8 258 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 ENOSF1Q7L5Y1 443 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 CLNKQ7Z7G1 428 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 TADA2BQ86TJ2 420 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 SCN4BQ8IWT1 228 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 UBALD2Q8IYN6 164 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 C12orf76Q8N812 135 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-208ENST00000469585 OR5B17Q8NGF7 314 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 OR56A3Q8NH54 315 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-208ENST00000469585 MRPS31Q92665 395 aaKnown RBP6.52□□□□□ -1.37
PTCD3-208ENST00000469585 GOLGA1Q92805 767 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 SMARCD1Q96GM5 515 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 SLITRK1Q96PX8 696 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 VN1R3Q9BXE9 311 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 C1QTNF1Q9BXJ1 281 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 ALOXE3Q9BYJ1 711 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 ZCWPW1Q9H0M4 648 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 IKZF4Q9H2S9 585 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 WDR6Q9NNW5 1121 aaKnown RBP6.52□□□□□ -1.37
PTCD3-208ENST00000469585 GDE1Q9NZC3 331 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 IGSF9Q9P2J2 1179 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 MAGED2Q9UNF1 606 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-208ENST00000469585 YIPF1Q9Y548 306 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 CEP83Q9Y592 693 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 SNX13Q9Y5W8 968 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 TRIP11Q15643 1979 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 MTMR11A4FU01 709 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 TRIM49BA6NDI0 452 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 MED7O43513 233 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 RFPL2O75678 378 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 RTN3O95197 1032 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-208ENST00000469585 RHOP08100 348 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 FAM200BP0CF97 657 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 IL9P15248 144 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 DESP17661 470 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 CD58P19256 250 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 DDX6P26196 483 aaKnown RBP eCLIP6.51□□□□□ -1.37
PTCD3-208ENST00000469585 EEF1GP26641 437 aaKnown RBP6.51□□□□□ -1.37
PTCD3-208ENST00000469585 CASP4P49662 377 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 WNT3P56703 355 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 MYL5Q02045 173 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 DAG1Q14118 895 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 SYCP1Q15431 976 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 GEN1Q17RS7 908 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 SPDYE7PQ495Y7 208 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 SLC44A4Q53GD3 710 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 MDH1BQ5I0G3 518 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 SYCE2Q6PIF2 218 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 GBP6Q6ZN66 633 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 GRASPQ7Z6J2 395 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-208ENST00000469585 RNF152Q8N8N0 203 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 B3GALNT2Q8NCR0 500 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 MSANTD4Q8NCY6 345 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 RNF31Q96EP0 1072 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 EEF2KMTQ96G04 330 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 CNOT6LQ96LI5 555 aaKnown RBP6.51□□□□□ -1.37
PTCD3-208ENST00000469585 SLC46A1Q96NT5 459 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 ELAC2Q9BQ52 826 aaKnown RBP6.51□□□□□ -1.37
PTCD3-208ENST00000469585 HEPHQ9BQS7 1158 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 PI4K2AQ9BTU6 479 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 CXCL16Q9H2A7 254 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 PDCL3Q9H2J4 239 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 FBXO44Q9H4M3 255 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 GALNT9Q9HCQ5 603 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 DMAP1Q9NPF5 467 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-208ENST00000469585 GCNT4Q9P109 453 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 CDH7Q9ULB5 785 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 KIAA1257Q9ULG3 409 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 NOX1Q9Y5S8 564 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 RAD54BQ9Y620 910 aa6.51□□□□□ -1.37
PTCD3-208ENST00000469585 PDCD11Q14690 1871 aaKnown RBP6.51□□□□□ -1.37
PTCD3-208ENST00000469585 CENPVL1A0A0U1RR11 272 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 MBD3L4A6NDZ8 208 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-208ENST00000469585 MBD3L3A6NE82 208 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-208ENST00000469585 KCNJ18B7U540 433 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 RASA4BC9J798 803 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 PYCARD-AS1I3L0S3 204 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 MYO1CO00159 1063 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 TOR1BO14657 336 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 PPEF2O14830 753 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 RASA4O43374 803 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 DCXO43602 365 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 ASS1P00966 412 aaKnown RBP6.5□□□□□ -1.37
PTCD3-208ENST00000469585 OR4Q2P0C623 313 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 CCDC172P0C7W6 258 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 KRT5P13647 590 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 CD19P15391 556 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 TSHRP16473 764 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 CHRM3P20309 590 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 ACAT1P24752 427 aaKnown RBP6.5□□□□□ -1.37
PTCD3-208ENST00000469585 USP8P40818 1118 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms