RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 A0A087X0T9 212 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 PRSS38A1L453 326 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 CD48P09326 243 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 FAM228BP0C875 321 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 HGFP14210 728 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 KELP23276 732 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 VIPR1P32241 457 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 ETV3P41162 512 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 TSPAN33Q86UF1 283 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 CPNE8Q86YQ8 564 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 ARL14Q8N4G2 192 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 ATPAF2Q8N5M1 289 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 LSM14AQ8ND56 463 aaKnown RBP24.5■■□□□ 1.51
PTCH1-210ENST00000468211 TEKT4Q8WW24 435 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 SMIM14Q96QK8 99 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 NUP85Q9BW27 656 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 ANAPC7Q9UJX3 599 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 ATXN7L1Q9ULK2 861 aaPredicted RBP24.5■■□□□ 1.51
PTCH1-210ENST00000468211 RNF215Q9Y6U7 377 aa24.5■■□□□ 1.51
PTCH1-210ENST00000468211 A0A1W2PQJ5 194 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 NPIPB15A6NHN6 443 aaPredicted RBP24.49■■□□□ 1.51
PTCH1-210ENST00000468211 B4DGG1 531 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 CYP1A2P05177 515 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 MMP13P45452 471 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 UCNP55089 124 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 INHBCP55103 352 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 C19orf57Q0VDD7 668 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 CERCAMQ5T4B2 595 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 RAB11FIP2Q7L804 512 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 HEATR4Q86WZ0 1026 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 NRROSQ86YC3 692 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 CCNJLQ8IV13 435 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 CPLX3Q8WVH0 158 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 SYN2Q92777 582 aaPredicted RBP24.49■■□□□ 1.51
PTCH1-210ENST00000468211 TEX101Q9BY14 249 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 SUDS3Q9H7L9 328 aaPredicted RBP24.49■■□□□ 1.51
PTCH1-210ENST00000468211 SPATS2LQ9NUQ6 558 aaKnown RBP24.49■■□□□ 1.51
PTCH1-210ENST00000468211 IP6K2Q9UHH9 426 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 APPL1Q9UKG1 709 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 PHTF1Q9UMS5 762 aa24.49■■□□□ 1.51
PTCH1-210ENST00000468211 SYCE3A1L190 88 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 AGRPO00253 132 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 PLD2O14939 933 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 ZFC3H1O60293 1989 aaKnown RBP24.48■■□□□ 1.51
PTCH1-210ENST00000468211 PGLSO95336 258 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 CEACAM5P06731 702 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 ITGA2BP08514 1039 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 MYCLP1P12525 358 aaPredicted RBP24.48■■□□□ 1.51
PTCH1-210ENST00000468211 GLB1P16278 677 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 CTPS1P17812 591 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 UGT1A5P35504 534 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 CLN3Q13286 438 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 HLTFQ14527 1009 aaKnown RBP eCLIP24.48■■□□□ 1.51
PTCH1-210ENST00000468211 IHHQ14623 411 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 ATP13A4Q4VNC1 1196 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 C14orf28Q4W4Y0 310 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 MARC1Q5VT66 337 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 SPECC1LQ69YQ0 1117 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 RFLNAQ6ZTI6 216 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 Q6ZVL8 140 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 TMPRSS9Q7Z410 1059 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 FBXO39Q8N4B4 442 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 OR6C4Q8NGE1 309 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 AHCTF1Q8WYP5 2266 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 DTD2Q96FN9 168 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 DPEP2Q9H4A9 486 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 NT5MQ9NPB1 228 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 LRIT1Q9P2V4 623 aa24.48■■□□□ 1.51
PTCH1-210ENST00000468211 BZW2Q9Y6E2 419 aaKnown RBP24.48■■□□□ 1.51
PTCH1-210ENST00000468211 A0A1W2PQ67 120 aa24.47■■□□□ 1.51
PTCH1-210ENST00000468211 SERPING1P05155 500 aa24.47■■□□□ 1.51
PTCH1-210ENST00000468211 PDHA1P08559 390 aa24.47■■□□□ 1.51
PTCH1-210ENST00000468211 MLLT3P42568 568 aaPredicted RBP24.47■■□□□ 1.51
PTCH1-210ENST00000468211 ARSEP51690 589 aa24.47■■□□□ 1.51
PTCH1-210ENST00000468211 CDH6P55285 790 aa24.47■■□□□ 1.51
PTCH1-210ENST00000468211 VAC14Q08AM6 782 aa24.47■■□□□ 1.51
PTCH1-210ENST00000468211 SPRED1Q7Z699 444 aa24.47■■□□□ 1.51
PTCH1-210ENST00000468211 ZNF843Q8N446 348 aa24.47■■□□□ 1.51
PTCH1-210ENST00000468211 FAM71BQ8TC56 605 aa24.47■■□□□ 1.51
PTCH1-210ENST00000468211 SNRNP27Q8WVK2 155 aaKnown RBP24.47■■□□□ 1.51
PTCH1-210ENST00000468211 PIH1D2Q8WWB5 315 aa24.47■■□□□ 1.51
PTCH1-210ENST00000468211 SCRN2Q96FV2 425 aa24.47■■□□□ 1.51
PTCH1-210ENST00000468211 MCCC1Q96RQ3 725 aaPredicted RBP24.47■■□□□ 1.51
PTCH1-210ENST00000468211 FRMD8Q9BZ67 464 aaPredicted RBP24.47■■□□□ 1.51
PTCH1-210ENST00000468211 CARS2Q9HA77 564 aaKnown RBP24.47■■□□□ 1.51
PTCH1-210ENST00000468211 ST14Q9Y5Y6 855 aa24.47■■□□□ 1.51
PTCH1-210ENST00000468211 MFSD11O43934 449 aa24.46■■□□□ 1.51
PTCH1-210ENST00000468211 CCKBRP32239 447 aa24.46■■□□□ 1.51
PTCH1-210ENST00000468211 SERPINB6P35237 376 aa24.46■■□□□ 1.51
PTCH1-210ENST00000468211 POLD2P49005 469 aa24.46■■□□□ 1.51
PTCH1-210ENST00000468211 ZBED6P86452 979 aa24.46■■□□□ 1.51
PTCH1-210ENST00000468211 KRT81Q14533 505 aa24.46■■□□□ 1.51
PTCH1-210ENST00000468211 BBS5Q8N3I7 341 aa24.46■■□□□ 1.51
PTCH1-210ENST00000468211 TEX26Q8N6G2 289 aa24.46■■□□□ 1.51
PTCH1-210ENST00000468211 GPBAR1Q8TDU6 330 aa24.46■■□□□ 1.51
PTCH1-210ENST00000468211 PHPT1Q9NRX4 125 aaPredicted RBP24.46■■□□□ 1.51
PTCH1-210ENST00000468211 CAPN11Q9UMQ6 739 aa24.46■■□□□ 1.51
PTCH1-210ENST00000468211 ZNF462Q96JM2 2506 aa24.45■■□□□ 1.51
PTCH1-210ENST00000468211 ERVH48-1M5A8F1 160 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 PDE2AO00408 941 aaPredicted RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms