RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 CNTNAP3Q9BZ76 1288 aa13.28□□□□□ -0.28
PDCD11-202ENST00000466959 TPSD1Q9BZJ3 242 aa13.28□□□□□ -0.28
PDCD11-202ENST00000466959 GPR63Q9BZJ6 419 aa13.28□□□□□ -0.28
PDCD11-202ENST00000466959 TSPYL1Q9H0U9 437 aa13.28□□□□□ -0.28
PDCD11-202ENST00000466959 KDM4CQ9H3R0 1056 aa13.28□□□□□ -0.28
PDCD11-202ENST00000466959 SGK2Q9HBY8 427 aa13.28□□□□□ -0.28
PDCD11-202ENST00000466959 PREBQ9HCU5 417 aa13.28□□□□□ -0.28
PDCD11-202ENST00000466959 CD93Q9NPY3 652 aa13.28□□□□□ -0.28
PDCD11-202ENST00000466959 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDCD11-202ENST00000466959 GGT7Q9UJ14 662 aa13.28□□□□□ -0.28
PDCD11-202ENST00000466959 TCAF1Q9Y4C2 921 aa13.28□□□□□ -0.28
PDCD11-202ENST00000466959 DMDP11532 3685 aa13.28□□□□□ -0.28
PDCD11-202ENST00000466959 CACNA1IQ9P0X4 2223 aa13.28□□□□□ -0.28
PDCD11-202ENST00000466959 TPRP12270 2363 aaKnown RBP13.28□□□□□ -0.28
PDCD11-202ENST00000466959 DCHS1Q96JQ0 3298 aa13.28□□□□□ -0.28
PDCD11-202ENST00000466959 ACACBO00763 2458 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 CCDC163A0A0D9SF12 145 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 C2orf81A6NN90 581 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 A8MX80 341 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 NEMP1O14524 444 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 AXIN1O15169 862 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 CTIFO43310 598 aaKnown RBP13.27□□□□□ -0.29
PDCD11-202ENST00000466959 BANF1O75531 89 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 TDGF1P13385 188 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 PXNP49023 591 aaPredicted RBP13.27□□□□□ -0.29
PDCD11-202ENST00000466959 STC1P52823 247 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 CRADDP78560 199 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 PDE1BQ01064 536 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 PDIA2Q13087 525 aaKnown RBP13.27□□□□□ -0.29
PDCD11-202ENST00000466959 ARHGEF7Q14155 803 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 CNGA3Q16281 694 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 CCDC38Q502W7 563 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 LRRC66Q68CR7 880 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 LIPIQ6XZB0 460 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 CCNI2Q6ZMN8 369 aaPredicted RBP13.27□□□□□ -0.29
PDCD11-202ENST00000466959 FAM124AQ86V42 546 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 CCDC25Q86WR0 208 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 MPP5Q8N3R9 675 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 OR14C36Q8NHC7 312 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 CXorf40AQ8TE69 158 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 STAMBPL1Q96FJ0 436 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 PARD6BQ9BYG5 372 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 BTBD1Q9H0C5 482 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 ZFYVE1Q9HBF4 777 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 MRM3Q9HC36 420 aaKnown RBP13.27□□□□□ -0.29
PDCD11-202ENST00000466959 SAYSD1Q9NPB0 183 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 SAMD15Q9P1V8 674 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 RAB21Q9UL25 225 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 SOX13Q9UN79 622 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 CYP8B1Q9UNU6 501 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 ARL5AQ9Y689 179 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 R4GN57 208 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 VPS13AQ96RL7 3174 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 PLXNA2O75051 1894 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 NUMA1Q14980 2115 aa13.27□□□□□ -0.29
PDCD11-202ENST00000466959 IGHV1OR15-9A0A0B4J2B8 117 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 A0A0U1RQS6 177 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 MAGEB16A2A368 324 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 MROH6A6NGR9 719 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 PSMD11O00231 422 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 AURKAO14965 403 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 LDB2O43679 373 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 CLDN7O95471 211 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 SLC4A1P02730 911 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 ELFN1P0C7U0 828 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 MYBL2P10244 700 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 LPOP22079 712 aaPredicted RBP13.26□□□□□ -0.29
PDCD11-202ENST00000466959 ELK3P41970 407 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 LIG3P49916 1009 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 ZNF140P52738 457 aaPredicted RBP13.26□□□□□ -0.29
PDCD11-202ENST00000466959 MAP7D1Q3KQU3 841 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 KIAA1161Q6NSJ0 714 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 NEK5Q6P3R8 708 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 CASC4Q6P4E1 433 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 NLRP9Q7RTR0 991 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 TMC3Q7Z5M5 1100 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 WDR5BQ86VZ2 330 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 GSPT2Q8IYD1 628 aaKnown RBP13.26□□□□□ -0.29
PDCD11-202ENST00000466959 MAML2Q8IZL2 1156 aaPredicted RBP13.26□□□□□ -0.29
PDCD11-202ENST00000466959 OR2T34Q8NGX1 318 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 EBNA1BP2Q99848 306 aaKnown RBP13.26□□□□□ -0.29
PDCD11-202ENST00000466959 C19orf43Q9BQ61 176 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 WDR83Q9BRX9 315 aaKnown RBP13.26□□□□□ -0.29
PDCD11-202ENST00000466959 NAT9Q9BTE0 207 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 WRAP53Q9BUR4 548 aaKnown RBP13.26□□□□□ -0.29
PDCD11-202ENST00000466959 KIFC1Q9BW19 673 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 WSB2Q9NYS7 404 aaPredicted RBP13.26□□□□□ -0.29
PDCD11-202ENST00000466959 FBXO4Q9UKT5 387 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 RIMKLBQ9ULI2 386 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 MAD1L1Q9Y6D9 718 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 TEX264Q9Y6I9 313 aa13.26□□□□□ -0.29
PDCD11-202ENST00000466959 TRPM6Q9BX84 2022 aa13.25□□□□□ -0.29
PDCD11-202ENST00000466959 FAM237BA0A1B0GVD1 139 aa13.25□□□□□ -0.29
PDCD11-202ENST00000466959 LRRC72A6NJI9 287 aa13.25□□□□□ -0.29
PDCD11-202ENST00000466959 STX7O15400 261 aaKnown RBP13.25□□□□□ -0.29
PDCD11-202ENST00000466959 RNGTTO60942 597 aaKnown RBP13.25□□□□□ -0.29
PDCD11-202ENST00000466959 PCDH8O95206 1070 aa13.25□□□□□ -0.29
PDCD11-202ENST00000466959 SEMA4FO95754 770 aa13.25□□□□□ -0.29
PDCD11-202ENST00000466959 C1SP09871 688 aa13.25□□□□□ -0.29
PDCD11-202ENST00000466959 C6P13671 934 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms