RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 PHF7Q9BWX1 381 aaPredicted RBP18.68■□□□□ 0.58
CAPN3-209ENST00000466222 ARNT2Q9HBZ2 717 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 NUP210Q8TEM1 1887 aaPredicted RBP18.67■□□□□ 0.58
CAPN3-209ENST00000466222 BUD23O43709 281 aaKnown RBP18.67■□□□□ 0.58
CAPN3-209ENST00000466222 ATP5BP06576 529 aaKnown RBP18.67■□□□□ 0.58
CAPN3-209ENST00000466222 PYGBP11216 843 aa18.67■□□□□ 0.58
CAPN3-209ENST00000466222 NEFHP12036 1026 aa18.67■□□□□ 0.58
CAPN3-209ENST00000466222 HLA-EP13747 358 aa18.67■□□□□ 0.58
CAPN3-209ENST00000466222 NMBRP28336 390 aa18.67■□□□□ 0.58
CAPN3-209ENST00000466222 SERPINB4P48594 390 aa18.67■□□□□ 0.58
CAPN3-209ENST00000466222 RFWD2Q8NHY2 731 aa18.67■□□□□ 0.58
CAPN3-209ENST00000466222 FAM111AQ96PZ2 611 aa18.67■□□□□ 0.58
CAPN3-209ENST00000466222 KLF6Q99612 283 aaPredicted RBP18.67■□□□□ 0.58
CAPN3-209ENST00000466222 SLC17A6Q9P2U8 582 aa18.67■□□□□ 0.58
CAPN3-209ENST00000466222 SLC2A6Q9UGQ3 507 aa18.67■□□□□ 0.58
CAPN3-209ENST00000466222 PCDHB9Q9Y5E1 797 aa18.67■□□□□ 0.58
CAPN3-209ENST00000466222 MYO18AQ92614 2054 aaKnown RBP18.67■□□□□ 0.58
CAPN3-209ENST00000466222 AURKAO14965 403 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 NARSO43776 548 aaKnown RBP18.66■□□□□ 0.58
CAPN3-209ENST00000466222 PEX11AO75192 247 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 KRT38O76015 456 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 F7P08709 466 aaPredicted RBP18.66■□□□□ 0.58
CAPN3-209ENST00000466222 NPY2RP49146 381 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 SERPINB9P50453 376 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 GALK1P51570 392 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 CCNHP51946 323 aaPredicted RBP18.66■□□□□ 0.58
CAPN3-209ENST00000466222 DBN1Q16643 649 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 MYLK3Q32MK0 819 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 CMPK2Q5EBM0 449 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 ATG16L1Q676U5 607 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 ZSWIM9Q86XI8 627 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 LPCAT1Q8NF37 534 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 SKA1Q96BD8 255 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 RMDN1Q96DB5 314 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 FEM1CQ96JP0 617 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 ACOX2Q99424 681 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 IL22Q9GZX6 179 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 SMYD2Q9NRG4 433 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 KCTD3Q9Y597 815 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 RPS6KL1Q9Y6S9 549 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 CHD5Q8TDI0 1954 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 CXorf49A8MYA2 514 aaPredicted RBP18.66■□□□□ 0.58
CAPN3-209ENST00000466222 TRIM49D1C9J1S8 452 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 KAT7O95251 611 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 CBX6O95503 412 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 IL9P15248 144 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 SEPT6Q14141 434 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 PTPRCAPQ14761 206 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 SMAD2Q15796 467 aaKnown RBP18.66■□□□□ 0.58
CAPN3-209ENST00000466222 CARD16Q5EG05 197 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 CYS1Q717R9 158 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 BLOC1S5Q8TDH9 187 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 WFIKKN2Q8TEU8 576 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 EZH1Q92800 747 aaPredicted RBP18.66■□□□□ 0.58
CAPN3-209ENST00000466222 PTPRN2Q92932 1015 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 ISG20Q96AZ6 181 aaKnown RBP18.66■□□□□ 0.58
CAPN3-209ENST00000466222 NSL1Q96IY1 281 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 C7orf26Q96N11 449 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 SRPK1Q96SB4 655 aaKnown RBP18.66■□□□□ 0.58
CAPN3-209ENST00000466222 ZDHHC6Q9H6R6 413 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 HEBP1Q9NRV9 189 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 HEY2Q9UBP5 337 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 PLA2G4CQ9UP65 541 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 SPO11Q9Y5K1 396 aa18.66■□□□□ 0.58
CAPN3-209ENST00000466222 GOLGA8TH3BQL2 631 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 NDST3O95803 873 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 IGSF6O95976 241 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 RPSAP08865 295 aaKnown RBP18.65■□□□□ 0.58
CAPN3-209ENST00000466222 PGAM1P18669 254 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 GNAZP19086 355 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 CES1P23141 567 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 CNTFP26441 200 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 PTCRAQ6ISU1 281 aaPredicted RBP18.65■□□□□ 0.58
CAPN3-209ENST00000466222 TMEM135Q86UB9 458 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 CTAGE3PQ8IX95 158 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 PPM1NQ8N819 430 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 GRIN3AQ8TCU5 1115 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 PTCD3Q96EY7 689 aaKnown RBP18.65■□□□□ 0.58
CAPN3-209ENST00000466222 BTBD10Q9BSF8 475 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 TMEM120AQ9BXJ8 343 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 DCTN4Q9UJW0 460 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 ARL5AQ9Y689 179 aa18.65■□□□□ 0.58
CAPN3-209ENST00000466222 A0A0G2JND7 137 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 ZCWPW2A0A1B0GU75 182 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 CCL22O00626 93 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 LIN7AO14910 233 aaPredicted RBP18.64■□□□□ 0.58
CAPN3-209ENST00000466222 FZD6O60353 706 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 UGT1A9O60656 530 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 EPOP01588 193 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 CTPS1P17812 591 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 AP1S1P61966 158 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 SNRPD1P62314 119 aaKnown RBP18.64■□□□□ 0.58
CAPN3-209ENST00000466222 SEMG2Q02383 582 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 BCL2L1Q07817 233 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 OVGP1Q12889 678 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 POM121L1PQ3SYA9 428 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 ANKRD20A4Q4UJ75 823 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 PCID2Q5JVF3 399 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 GPR153Q6NV75 609 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 ESRP1Q6NXG1 681 aaKnown RBP18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms