RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 SRSF3P84103 164 aaKnown RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 NSUN2Q08J23 767 aaKnown RBP eCLIP5.57□□□□□ -1.52
VPS41-211ENST00000466017 WASHC5Q12768 1159 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 CALCOCO2Q13137 446 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 SERINC3Q13530 473 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 SEMA5AQ13591 1074 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 SSPNQ14714 243 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 SLMAPQ14BN4 828 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 POLD3Q15054 466 aaPredicted RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 TPSAB1Q15661 275 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 ANKRD20A2Q5SQ80 823 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 RNASEH2BQ5TBB1 312 aaKnown RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 ANKRD20A1Q5TYW2 823 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 ANKRD20A3Q5VUR7 823 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 DENND5AQ6IQ26 1287 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 RWDD4Q6NW29 188 aaKnown RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 ZDHHC24Q6UX98 284 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 TMC5Q6UXY8 1006 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 PPP1R21Q6ZMI0 780 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 CYS1Q717R9 158 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 PID1Q7Z2X4 250 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 ZC3H18Q86VM9 953 aaKnown RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 CCDC117Q8IWD4 279 aaPredicted RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 PPIL6Q8IXY8 311 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 LGI2Q8N0V4 545 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 CNPY4Q8N129 248 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.57□□□□□ -1.52
VPS41-211ENST00000466017 NAT16Q8N8M0 369 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 NAT8LQ8N9F0 302 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 FAM71DQ8N9W8 422 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 TDRD5Q8NAT2 981 aaKnown RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 BVESQ8NE79 360 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 BPIFB1Q8TDL5 484 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 FGF13Q92913 245 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 SMARCD2Q92925 531 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 EXOC4Q96A65 974 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 TADA1Q96BN2 335 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 LRRC39Q96DD0 335 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 ALG14Q96F25 216 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 LMLNQ96KR4 655 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 CCDC114Q96M63 670 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 RIPOR3Q96MK2 946 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 PRICKLE1Q96MT3 831 aaPredicted RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 SPATA13Q96N96 652 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 FCRL5Q96RD9 977 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 SLC38A3Q99624 504 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 TXLNGYQ9BZA5 131 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 EPC1Q9H2F5 836 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 TTYH1Q9H313 450 aaPredicted RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 VIPAS39Q9H9C1 493 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 PDFQ9HBH1 243 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 ARFGAP3Q9NP61 516 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 TNFRSF12AQ9NP84 129 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 HAUS2Q9NVX0 235 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 ACTR10Q9NZ32 417 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 MPP6Q9NZW5 540 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 CLEC1BQ9P126 229 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 CFAP97Q9P2B7 532 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 MTRF1LQ9UGC7 380 aaKnown RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 ASIC3Q9UHC3 531 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 IPO11Q9UI26 975 aaKnown RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 SHOC2Q9UQ13 582 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 ATP8A1Q9Y2Q0 1164 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 MYO9BQ13459 2157 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 OR14I1A6ND48 311 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 GOLGA6CA6NDK9 693 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 GOLGA6BA6NDN3 693 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 MAP2K7O14733 419 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 ALOX15BO15296 676 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 HOXC11O43248 304 aaPredicted RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 TBL1XO60907 577 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 ECI2O75521 394 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 ZMPSTE24O75844 475 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 LUC7L3O95232 432 aaKnown RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 EPOP01588 193 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 GOLGA6DP0CG33 693 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 CCNB1P14635 433 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 CEBPBP17676 345 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 PTPN3P26045 913 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 HSPA9P38646 679 aaKnown RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 CSNK1DP48730 415 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 ITGA8P53708 1063 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 PLTPP55058 493 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 GEMIN4P57678 1058 aaKnown RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 RPS24P62847 133 aaKnown RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 NTHL1P78549 312 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 SARNPP82979 210 aaKnown RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 GNA12Q03113 381 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 GAD2Q05329 585 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 SULT2A1Q06520 285 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 FCHO2Q0JRZ9 810 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 AP1B1Q10567 949 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 GPS1Q13098 491 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 KCNJ11Q14654 390 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 PDGFRLQ15198 375 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 TRADDQ15628 312 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 PRSS53Q2L4Q9 553 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 RARS2Q5T160 578 aaKnown RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 STXBP5Q5T5C0 1151 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 MARC1Q5VT66 337 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms