RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 CDR2Q01850 454 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 TRA2AQ13595 282 aaKnown RBP eCLIP11.79□□□□□ -0.52
CNOT4-208ENST00000465721 ESPL1Q14674 2120 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 IGFBP7Q16270 282 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 TSR1Q2NL82 804 aaKnown RBP11.79□□□□□ -0.52
CNOT4-208ENST00000465721 SLFN11Q7Z7L1 901 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 IL22RA1Q8N6P7 574 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 TSEN2Q8NCE0 465 aaKnown RBP11.79□□□□□ -0.52
CNOT4-208ENST00000465721 ZDHHC1Q8WTX9 485 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 ART4Q93070 314 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 NSMCE3Q96MG7 304 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 DDA1Q9BW61 102 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 STK33Q9BYT3 514 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 ATP13A3Q9H7F0 1226 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 CARS2Q9HA77 564 aaKnown RBP11.79□□□□□ -0.52
CNOT4-208ENST00000465721 TAAR2Q9P1P5 351 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 ANAPC2Q9UJX6 822 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 LRBAP50851 2863 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 RHPN2P1A8MT19 583 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 ZNF891A8MT65 544 aaPredicted RBP11.78□□□□□ -0.52
CNOT4-208ENST00000465721 FGF10O15520 208 aaPredicted RBP11.78□□□□□ -0.52
CNOT4-208ENST00000465721 DUX1O43812 170 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 CREB3O43889 395 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 GFPT2O94808 682 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 ECEL1O95672 775 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 FUCA1P04066 466 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 KRT3P12035 628 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 GPD1P21695 349 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 AK4P27144 223 aaPredicted RBP11.78□□□□□ -0.52
CNOT4-208ENST00000465721 ALDH4A1P30038 563 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 GPR3P46089 330 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 CSNK1DP48730 415 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 HSP90AA4PQ58FG1 418 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 PNCKQ6P2M8 343 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 WDR59Q6PJI9 974 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 SRLQ86TD4 932 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 FAM114A1Q8IWE2 563 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 CACNA2D3Q8IZS8 1091 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 AGBL5Q8NDL9 886 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 OR4D9Q8NGE8 314 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 PTCD2Q8WV60 388 aaKnown RBP11.78□□□□□ -0.52
CNOT4-208ENST00000465721 SLC45A3Q96JT2 553 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 COQ10AQ96MF6 247 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 GSDMCQ9BYG8 508 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 FRMD8Q9BZ67 464 aaPredicted RBP11.78□□□□□ -0.52
CNOT4-208ENST00000465721 CATSPERBQ9H7T0 1116 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 TMEM9Q9P0T7 183 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 MOSPD1Q9UJG1 213 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 FZD10Q9ULW2 581 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 MAN2B2Q9Y2E5 1009 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 MED13Q9UHV7 2174 aa11.78□□□□□ -0.52
CNOT4-208ENST00000465721 CELSR2Q9HCU4 2923 aa11.77□□□□□ -0.52
CNOT4-208ENST00000465721 IGHV1OR21-1A0A087WYE8 117 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 TCRBV5S1A1TA0A578 114 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 B4E171 279 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 TRAFD1O14545 582 aaPredicted RBP11.77□□□□□ -0.53
CNOT4-208ENST00000465721 TEX33O43247 280 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 RAD1O60671 282 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 CEACAM5P06731 702 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 UNGP13051 313 aaPredicted RBP11.77□□□□□ -0.53
CNOT4-208ENST00000465721 TSPAN7P41732 249 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 CCR10P46092 362 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 NDST2P52849 883 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 ILF3Q12906 894 aaKnown RBP eCLIP11.77□□□□□ -0.53
CNOT4-208ENST00000465721 SQSTM1Q13501 440 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 CNGA3Q16281 694 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 CAMK4Q16566 473 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 TPD52L1Q16890 204 aaPredicted RBP11.77□□□□□ -0.53
CNOT4-208ENST00000465721 NKAIN2Q5VXU1 208 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 TRIM72Q6ZMU5 477 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 HEATR4Q86WZ0 1026 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 NAGSQ8N159 534 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 BMPERQ8N8U9 685 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 MLKLQ8NB16 471 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 C3orf20Q8ND61 904 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 CCDC112Q8NEF3 446 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 C9orf43Q8TAL5 461 aaPredicted RBP11.77□□□□□ -0.53
CNOT4-208ENST00000465721 NUS1Q96E22 293 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 CELF6Q96J87 481 aaKnown RBP11.77□□□□□ -0.53
CNOT4-208ENST00000465721 CATSPER2Q96P56 530 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 PCDHB18PQ96TA0 734 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 TEX101Q9BY14 249 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 SUDS3Q9H7L9 328 aaPredicted RBP11.77□□□□□ -0.53
CNOT4-208ENST00000465721 TRNAU1APQ9NX07 287 aaKnown RBP11.77□□□□□ -0.53
CNOT4-208ENST00000465721 OCIAD1Q9NX40 245 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 B4GALT6Q9UBX8 382 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 PILRAQ9UKJ1 303 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 BOLA1Q9Y3E2 137 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 DOPEY1Q5JWR5 2465 aa11.77□□□□□ -0.53
CNOT4-208ENST00000465721 A8MX80 341 aa11.76□□□□□ -0.53
CNOT4-208ENST00000465721 PDE2AO00408 941 aaPredicted RBP11.76□□□□□ -0.53
CNOT4-208ENST00000465721 PPM1DO15297 605 aa11.76□□□□□ -0.53
CNOT4-208ENST00000465721 OAS2P29728 719 aaKnown RBP11.76□□□□□ -0.53
CNOT4-208ENST00000465721 CSTF2P33240 577 aaKnown RBP eCLIP11.76□□□□□ -0.53
CNOT4-208ENST00000465721 GNPDA1P46926 289 aa11.76□□□□□ -0.53
CNOT4-208ENST00000465721 PAPOLAP51003 745 aaKnown RBP11.76□□□□□ -0.53
CNOT4-208ENST00000465721 ZNF143P52747 638 aaPredicted RBP11.76□□□□□ -0.53
CNOT4-208ENST00000465721 AIF1P55008 147 aa11.76□□□□□ -0.53
CNOT4-208ENST00000465721 JAM2P57087 298 aa11.76□□□□□ -0.53
CNOT4-208ENST00000465721 TPI1P60174 286 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms