RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 CLDN7O95471 211 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 PCCBP05166 539 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 STIP1P31948 543 aaKnown RBP12.39□□□□□ -0.43
CHPF2-202ENST00000465601 ETV3P41162 512 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 CHRNA4P43681 627 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 RABIFP47224 123 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 GEMP55040 296 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 MPP3Q13368 585 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 PRPSAP1Q14558 356 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 AGERQ15109 404 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 CCNG2Q16589 344 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 CDKN3Q16667 212 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 ZNF423Q2M1K9 1284 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 TPRG1LQ5T0D9 272 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 ARHGEF18Q6ZSZ5 1173 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 Q6ZVL8 140 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 SLC22A18ASQ8N1D0 253 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 TAB3Q8N5C8 712 aaPredicted RBP12.39□□□□□ -0.43
CHPF2-202ENST00000465601 PLA2G15Q8NCC3 412 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 FAM174AQ8TBP5 190 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 COG1Q8WTW3 980 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 WDR24Q96S15 920 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 OSBPL9Q96SU4 736 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 DNAAF2Q9NVR5 837 aaKnown RBP12.39□□□□□ -0.43
CHPF2-202ENST00000465601 SHOC2Q9UQ13 582 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 KNTC1P50748 2209 aa12.39□□□□□ -0.43
CHPF2-202ENST00000465601 ARHGEF17Q96PE2 2063 aaPredicted RBP12.38□□□□□ -0.43
CHPF2-202ENST00000465601 C1orf232A0A0U1RR37 186 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 PSMD11O00231 422 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 METTL18O95568 372 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 AGTP01019 485 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 IFNB1P01574 187 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 EPOP01588 193 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 C1SP09871 688 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 ATXN1LP0C7T5 689 aaKnown RBP12.38□□□□□ -0.43
CHPF2-202ENST00000465601 ETS1P14921 441 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 ZNF30P17039 623 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 TNNT3P45378 269 aaPredicted RBP12.38□□□□□ -0.43
CHPF2-202ENST00000465601 KCNJ1P48048 391 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 STC1P52823 247 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 PFN3P60673 137 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 IL9RQ01113 521 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 OLIG2Q13516 323 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 PDE1CQ14123 709 aaPredicted RBP12.38□□□□□ -0.43
CHPF2-202ENST00000465601 INPP5AQ14642 412 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 PARP6Q2NL67 630 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 SIRPB2Q5JXA9 342 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 TECPR1Q7Z6L1 1165 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 PRUNE1Q86TP1 453 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 DCP2Q8IU60 420 aaKnown RBP12.38□□□□□ -0.43
CHPF2-202ENST00000465601 PELI3Q8N2H9 469 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 RASGEF1CQ8N431 466 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 NUS1Q96E22 293 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 DTD2Q96FN9 168 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 LYSMD1Q96S90 227 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 ELF4Q99607 663 aaPredicted RBP12.38□□□□□ -0.43
CHPF2-202ENST00000465601 FICDQ9BVA6 458 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 CAAP1Q9H8G2 361 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 ERVMER34-1Q9H9K5 563 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 TM7SF3Q9NS93 570 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 SMARCAL1Q9NZC9 954 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 CD84Q9UIB8 345 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 SNX12Q9UMY4 172 aa12.38□□□□□ -0.43
CHPF2-202ENST00000465601 DRG1Q9Y295 367 aaKnown RBP12.38□□□□□ -0.43
CHPF2-202ENST00000465601 AAR2Q9Y312 384 aaKnown RBP12.38□□□□□ -0.43
CHPF2-202ENST00000465601 A0A1B0GTQ1 180 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 DCDC2BA2VCK2 349 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 GOLGA6CA6NDK9 693 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 GOLGA6BA6NDN3 693 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 K7ESM1 405 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 TM4SF5O14894 197 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 ZNF185O15231 689 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 DFNA5O60443 496 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 ITGAVP06756 1048 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 GOLGA6DP0CG33 693 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 CD59P13987 128 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 SDHBP21912 280 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 THOP1P52888 689 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 YPEL5P62699 121 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 BNIP3Q12983 259 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 MTM1Q13496 603 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 FZD2Q14332 565 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 SPARCL1Q14515 664 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 SHBQ15464 509 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 SLC1A5Q15758 541 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 ZNF542PQ5EBM4 170 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 FAXCQ5TGI0 409 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 DRICH1Q6PGQ1 229 aaPredicted RBP12.37□□□□□ -0.43
CHPF2-202ENST00000465601 LYSMD3Q7Z3D4 306 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 PRELID2Q8N945 189 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 CCHCR1Q8TD31 782 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 EID2BQ96D98 161 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 RTP4Q96DX8 246 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 APOL2Q9BQE5 337 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 RTKNQ9BST9 563 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 APOOQ9BUR5 198 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 FSD1LQ9BXM9 530 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 AP1M1Q9BXS5 423 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 ABCG8Q9H221 673 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 MAGEE1Q9HCI5 957 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms