RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 DTD2Q96FN9 168 aa21.8■■□□□ 1.08
LIME1-203ENST00000465591 USP29Q9HBJ7 922 aa21.8■■□□□ 1.08
LIME1-203ENST00000465591 KIF26BQ2KJY2 2108 aa21.8■■□□□ 1.08
LIME1-203ENST00000465591 EME2A4GXA9 379 aaPredicted RBP21.79■■□□□ 1.08
LIME1-203ENST00000465591 ZNF487B1APH4 448 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 LCA5LO95447 670 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 GP1BAP07359 652 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 CYP2A6P11509 494 aaPredicted RBP21.79■■□□□ 1.08
LIME1-203ENST00000465591 MX2P20592 715 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 MAGEA1P43355 309 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 BLKP51451 505 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 DUSP3P51452 185 aaPredicted RBP21.79■■□□□ 1.08
LIME1-203ENST00000465591 ZNF75DP51815 510 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 PPIDQ08752 370 aaKnown RBP21.79■■□□□ 1.08
LIME1-203ENST00000465591 Q6ZVL8 140 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 GAS2L3Q86XJ1 694 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 CACTIN-AS1Q8N1I8 211 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 CNTD1Q8N815 330 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 CCNYQ8ND76 341 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 TPCN2Q8NHX9 752 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 ANP32EQ9BTT0 268 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 TDRD1Q9BXT4 1180 aaKnown RBP21.79■■□□□ 1.08
LIME1-203ENST00000465591 CHKBQ9Y259 395 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 PCDHB1Q9Y5F3 818 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 HEY1Q9Y5J3 304 aa21.79■■□□□ 1.08
LIME1-203ENST00000465591 CACNB4O00305 520 aaPredicted RBP21.78■■□□□ 1.08
LIME1-203ENST00000465591 JCHAINP01591 159 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 MMP2P08253 660 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 HOXC4P09017 264 aaPredicted RBP21.78■■□□□ 1.08
LIME1-203ENST00000465591 TGM2P21980 687 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 SLC1A1P43005 524 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 NR0B2Q15466 257 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 CRTC1Q6UUV9 634 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 MFSD7Q6UXD7 560 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 USP45Q70EL2 814 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 B4GALNT4Q76KP1 1039 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 TECPR1Q7Z6L1 1165 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 VSIG1Q86XK7 387 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 RHOT1Q8IXI2 618 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 FSTL5Q8N475 847 aaPredicted RBP21.78■■□□□ 1.08
LIME1-203ENST00000465591 OR56A4Q8NGH8 313 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 WDR26Q9H7D7 661 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 AMACRQ9UHK6 382 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 DGKBQ9Y6T7 804 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 ADAMTS20P59510 1910 aa21.78■■□□□ 1.08
LIME1-203ENST00000465591 A0A0J9YYE9 177 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 APOL1O14791 398 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 TRBC1P01850 177 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 CTSEP14091 401 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 HADHBP55084 474 aaKnown RBP21.77■■□□□ 1.08
LIME1-203ENST00000465591 DYNLT1P63172 113 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 ELOCQ15369 112 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 LRRC66Q68CR7 880 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 HEATR4Q86WZ0 1026 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 SFTPA2Q8IWL1 248 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 KYQ8NBH2 561 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 MAPK15Q8TD08 544 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 PTCD2Q8WV60 388 aaKnown RBP21.77■■□□□ 1.08
LIME1-203ENST00000465591 NXPE2Q96DL1 559 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 OLFM3Q96PB7 478 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 RBM15Q96T37 977 aaKnown RBP eCLIP21.77■■□□□ 1.08
LIME1-203ENST00000465591 CEP41Q9BYV8 373 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 SIRPGQ9P1W8 387 aa21.77■■□□□ 1.08
LIME1-203ENST00000465591 PSMD11O00231 422 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 SPOPO43791 374 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 TNFP01375 233 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 FUCA1P04066 466 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 NOP2P46087 812 aaKnown RBP21.76■■□□□ 1.07
LIME1-203ENST00000465591 IFI35P80217 286 aaPredicted RBP21.76■■□□□ 1.07
LIME1-203ENST00000465591 PTSQ03393 145 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 ARHGEF7Q14155 803 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 RTP5Q14D33 572 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 LLGL1Q15334 1064 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 RFX6Q8HWS3 928 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 ATL2Q8NHH9 583 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 CCL4L1Q8NHW4 92 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.76■■□□□ 1.07
LIME1-203ENST00000465591 ZNF830Q96NB3 372 aaPredicted RBP21.76■■□□□ 1.07
LIME1-203ENST00000465591 TEX101Q9BY14 249 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 NRSN2Q9GZP1 204 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 TMEM168Q9H0V1 697 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 EVA1BQ9NVM1 165 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 NCKIPSDQ9NZQ3 722 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 CD84Q9UIB8 345 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 PCDHA13Q9Y5I0 950 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 ALG6Q9Y672 507 aa21.76■■□□□ 1.07
LIME1-203ENST00000465591 UNC13CQ8NB66 2214 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 SOD1P00441 154 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 MYCLP1P12525 358 aaPredicted RBP21.75■■□□□ 1.07
LIME1-203ENST00000465591 CES1P23141 567 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 CD86P42081 329 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 CDKN2BP42772 138 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 MARCKSL1P49006 195 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 SKOR1P84550 965 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 ADCY2Q08462 1091 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 TAZQ16635 292 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 LPCAT1Q8NF37 534 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 MRFAP1L1Q96HT8 127 aa21.75■■□□□ 1.07
LIME1-203ENST00000465591 MAK16Q9BXY0 300 aaKnown RBP21.75■■□□□ 1.07
LIME1-203ENST00000465591 ABCG8Q9H221 673 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms