RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 PRR11Q96HE9 360 aaPredicted RBP18.87■□□□□ 0.61
SF3A1-205ENST00000463818 SEMA3CQ99985 751 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 THSD1Q9NS62 852 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 KCTD5Q9NXV2 234 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 MFSD11O43934 449 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 PROSCO94903 275 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 H2AFZP0C0S5 128 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 CTPS1P17812 591 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 LHCGRP22888 699 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 ARHGEF7Q14155 803 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 PAFAH1B3Q15102 231 aaKnown RBP18.86■□□□□ 0.61
SF3A1-205ENST00000463818 ZSCAN23Q3MJ62 389 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 ANKRD20A8PQ5CZ79 823 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 NCBP2-AS2Q69YL0 99 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 FOXR1Q6PIV2 292 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 IGF2-ASQ6U949 168 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 Q6ZVL8 140 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 H2AFVQ71UI9 128 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 TSPAN33Q86UF1 283 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 CCL4L1Q8NHW4 92 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 FCRL3Q96P31 734 aaPredicted RBP18.86■□□□□ 0.61
SF3A1-205ENST00000463818 GFM1Q96RP9 751 aaKnown RBP18.86■□□□□ 0.61
SF3A1-205ENST00000463818 PACSIN1Q9BY11 444 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 PHPT1Q9NRX4 125 aaPredicted RBP18.86■□□□□ 0.61
SF3A1-205ENST00000463818 UVRAGQ9P2Y5 699 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 PPIL1Q9Y3C6 166 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 PCDHGA8Q9Y5G5 932 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 RP1P56715 2156 aa18.86■□□□□ 0.61
SF3A1-205ENST00000463818 A0A0U1RQS6 177 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 PRSS38A1L453 326 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 PMS2P1A4D2B8 440 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 NPIPB15A6NHN6 443 aaPredicted RBP18.85■□□□□ 0.61
SF3A1-205ENST00000463818 MATN3O15232 486 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 MAP3K6O95382 1288 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 RPLP0P05388 317 aaKnown RBP18.85■□□□□ 0.61
SF3A1-205ENST00000463818 TPM3P06753 285 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 PDHA1P08559 390 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 MYCLP1P12525 358 aaPredicted RBP18.85■□□□□ 0.61
SF3A1-205ENST00000463818 GARSP41250 739 aaKnown RBP18.85■□□□□ 0.61
SF3A1-205ENST00000463818 PDX1P52945 283 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 TAS2R40P59535 323 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 GALNT2Q10471 571 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 PDK2Q15119 407 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 MAP7D3Q8IWC1 876 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 SFTPA2Q8IWL1 248 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 Q8N9G6 341 aaPredicted RBP18.85■□□□□ 0.61
SF3A1-205ENST00000463818 WDR36Q8NI36 951 aaKnown RBP18.85■□□□□ 0.61
SF3A1-205ENST00000463818 CTNNBL1Q8WYA6 563 aaPredicted RBP18.85■□□□□ 0.61
SF3A1-205ENST00000463818 DTD2Q96FN9 168 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 MCCC1Q96RQ3 725 aaPredicted RBP18.85■□□□□ 0.61
SF3A1-205ENST00000463818 UBL7Q96S82 380 aaPredicted RBP18.85■□□□□ 0.61
SF3A1-205ENST00000463818 TEX101Q9BY14 249 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 LRRN3Q9H3W5 708 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 DPEP2Q9H4A9 486 aa18.85■□□□□ 0.61
SF3A1-205ENST00000463818 IGSF10Q6WRI0 2623 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 CCDC187A0A096LP49 1063 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 A0A1W2PQM1 296 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 EIF4E1BA6NMX2 242 aaKnown RBP18.84■□□□□ 0.61
SF3A1-205ENST00000463818 PSMD11O00231 422 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 NOBOXO60393 691 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 FUCA1P04066 466 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 CEACAM5P06731 702 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 CCNCP24863 283 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 CXADRP78310 365 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 SLC18A3Q16572 532 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 IFI16Q16666 785 aaKnown RBP18.84■□□□□ 0.61
SF3A1-205ENST00000463818 TSR1Q2NL82 804 aaKnown RBP18.84■□□□□ 0.61
SF3A1-205ENST00000463818 USP45Q70EL2 814 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 GPR155Q7Z3F1 870 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 TECPR1Q7Z6L1 1165 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 HEATR4Q86WZ0 1026 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 NDUFAF2Q8N183 169 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.84■□□□□ 0.61
SF3A1-205ENST00000463818 OR8K1Q8NGG5 319 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 LRRN4Q8WUT4 740 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 KCNE4Q8WWG9 221 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 MAML1Q92585 1016 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 TSGA13Q96PP4 275 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 SMIM14Q96QK8 99 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 ZNF670Q9BS34 389 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 POLR1EQ9GZS1 481 aaKnown RBP18.84■□□□□ 0.61
SF3A1-205ENST00000463818 SUDS3Q9H7L9 328 aaPredicted RBP18.84■□□□□ 0.61
SF3A1-205ENST00000463818 CARS2Q9HA77 564 aaKnown RBP18.84■□□□□ 0.61
SF3A1-205ENST00000463818 RBM22Q9NW64 420 aaKnown RBP eCLIP18.84■□□□□ 0.61
SF3A1-205ENST00000463818 LRRK1Q38SD2 2015 aa18.84■□□□□ 0.61
SF3A1-205ENST00000463818 GOLGA6CA6NDK9 693 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 GOLGA6BA6NDN3 693 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 FZD6O60353 706 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 TNFSF15O95150 251 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 KRT7P08729 469 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 GOLGA6DP0CG33 693 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 KRT10P13645 584 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 GLB1P16278 677 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 CES1P23141 567 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 DSC2Q02487 901 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 IHHQ14623 411 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 ASTE1Q2TB18 679 aaPredicted RBP18.83■□□□□ 0.6
SF3A1-205ENST00000463818 CERCAMQ5T4B2 595 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 BROXQ5VW32 411 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 RAET1GQ6H3X3 334 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms