RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 CENPTQ96BT3 561 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 COQ10AQ96MF6 247 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 RUNDC3BQ96NL0 473 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 TBL1YQ9BQ87 522 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 GTPBP2Q9BX10 602 aaKnown RBP19.81■□□□□ 0.76
COL9A3-204ENST00000463487 GPR63Q9BZJ6 419 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 RAB6BQ9NRW1 208 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 RAD18Q9NS91 495 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 ZFHX2Q9C0A1 2572 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-204ENST00000463487 A0A1W2PR77 199 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 METTL18O95568 372 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 AP2A1O95782 977 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 PYGLP06737 847 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 THEGLP0DJG4 465 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 TGM1P22735 817 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 COILP38432 576 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-204ENST00000463487 KCNJ1P48048 391 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 STC1P52823 247 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 THOP1P52888 689 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 YPEL5P62699 121 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 ARHGAP8P85298 464 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 MTM1Q13496 603 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 PTK2BQ14289 1009 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 GCNT7Q6ZNI0 430 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 NYAP1Q6ZVC0 841 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 ABI3BPQ7Z7G0 1075 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 KIAA2013Q8IYS2 634 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 NRSN1Q8IZ57 195 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 TP53I13Q8NBR0 393 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-204ENST00000463487 DTD2Q96FN9 168 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 KLF6Q99612 283 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-204ENST00000463487 CDH19Q9H159 772 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 TMEM9BQ9NQ34 198 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 ZNF711Q9Y462 761 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 SLCO1B1Q9Y6L6 691 aa19.8■□□□□ 0.76
COL9A3-204ENST00000463487 FAM186AA6NE01 2351 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 RGSL1A5PLK6 1076 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 RAD51BO15315 384 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 AGTP01019 485 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 PCCBP05166 539 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 ATXN1LP0C7T5 689 aaKnown RBP19.79■□□□□ 0.76
COL9A3-204ENST00000463487 SDHBP21912 280 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 CLDN2P57739 230 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 IRF4Q15306 451 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 WSCD2Q2TBF2 565 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 FAXCQ5TGI0 409 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 RANBP10Q6VN20 620 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 Q6ZSR6 202 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 ZNF765Q7L2R6 523 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 LYSMD3Q7Z3D4 306 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 HSD11B1LQ7Z5J1 315 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 CREG2Q8IUH2 290 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 KLHDC8BQ8IXV7 354 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 GORASP1Q9BQQ3 440 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 SMARCAL1Q9NZC9 954 aa19.79■□□□□ 0.76
COL9A3-204ENST00000463487 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.79■□□□□ 0.76
COL9A3-204ENST00000463487 RIF1Q5UIP0 2472 aaKnown RBP19.78■□□□□ 0.76
COL9A3-204ENST00000463487 H0Y8X5 98 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 CCDC188H7C350 402 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 YKT6O15498 198 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 CLDN7O95471 211 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 SLC4A1P02730 911 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 TSHRP16473 764 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 HTR1BP28222 390 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 RPL22P35268 128 aaKnown RBP19.78■□□□□ 0.76
COL9A3-204ENST00000463487 ADRA1AP35348 466 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 IGFALSP35858 605 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 ETV3P41162 512 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 CHRNA4P43681 627 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 ARRB1P49407 418 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-204ENST00000463487 NXPH1P58417 271 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 BASP1P80723 227 aaKnown RBP19.78■□□□□ 0.76
COL9A3-204ENST00000463487 PDE1BQ01064 536 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 PTSQ03393 145 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 SEMA5AQ13591 1074 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 KIF19Q2TAC6 998 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 ZDHHC20Q5W0Z9 365 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 ESRP1Q6NXG1 681 aaKnown RBP19.78■□□□□ 0.76
COL9A3-204ENST00000463487 LAYNQ6UX15 382 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 Q6ZVL8 140 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 GLT6D1Q7Z4J2 308 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 TAB3Q8N5C8 712 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-204ENST00000463487 PDCD7Q8N8D1 485 aaKnown RBP19.78■□□□□ 0.76
COL9A3-204ENST00000463487 OR13H1Q8NG92 308 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 BLOC1S5Q8TDH9 187 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 ETNK1Q9HBU6 452 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 SHOC2Q9UQ13 582 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 CA5BQ9Y2D0 317 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 SNX11Q9Y5W9 270 aa19.78■□□□□ 0.76
COL9A3-204ENST00000463487 EP300Q09472 2414 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-204ENST00000463487 POM121BA6NF01 834 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 C2orf81A6NN90 581 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 AP3B1O00203 1094 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 PDE2AO00408 941 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-204ENST00000463487 ECEL1O95672 775 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 CRTAMO95727 393 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 WNT1P04628 370 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 APRTP07741 180 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 C1SP09871 688 aa19.77■□□□□ 0.76
COL9A3-204ENST00000463487 PIRTP0C851 137 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms