RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 CTAGE15A4D2H0 777 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 CDHR4A6H8M9 788 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 AHRRA9YTQ3 701 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 C1QTNF3-AMACRE9PGA6 284 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 H7C4K7 107 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 SLC16A6O15403 523 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 PAPSS1O43252 624 aaPredicted RBP7.58□□□□□ -1.2
UBE4B-204ENST00000462658 CEP104O60308 925 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 BEST1O76090 585 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 CTAGE8P0CG41 777 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 BDNFP23560 247 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 PSMA2P25787 234 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 CTNNA2P26232 953 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 MAN1A1P33908 653 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 CTNNA1P35221 906 aaKnown RBP7.58□□□□□ -1.2
UBE4B-204ENST00000462658 SSR1P43307 286 aaKnown RBP7.58□□□□□ -1.2
UBE4B-204ENST00000462658 PEX5P50542 639 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 SLC25A3Q00325 362 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 BTG3Q14201 252 aaPredicted RBP7.58□□□□□ -1.2
UBE4B-204ENST00000462658 PIGHQ14442 188 aaPredicted RBP7.58□□□□□ -1.2
UBE4B-204ENST00000462658 MINDY4Q4G0A6 757 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 CFAP221Q4G0U5 840 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 CTXN3Q4LDR2 81 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 RABL3Q5HYI8 236 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 OLFML1Q6UWY5 402 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 C4orf50Q6ZRC1 276 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 CLEC20AQ6ZU45 233 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 CTAGE6Q86UF2 777 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 PIGZQ86VD9 579 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 ZDHHC17Q8IUH5 632 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 CTAGE4Q8IX94 777 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 DCP1BQ8IZD4 617 aaKnown RBP7.58□□□□□ -1.2
UBE4B-204ENST00000462658 JOSD2Q8TAC2 188 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.58□□□□□ -1.2
UBE4B-204ENST00000462658 CD101Q93033 1021 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 MYLPFQ96A32 169 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 MS4A14Q96JA4 679 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 PLEKHG4BQ96PX9 1271 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 PKMYT1Q99640 499 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 SMOQ99835 787 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 HTATIP2Q9BUP3 242 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 C1orf43Q9BWL3 253 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 ZCWPW1Q9H0M4 648 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 LRRC4Q9HBW1 653 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 MAN1C1Q9NR34 630 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 TMLHEQ9NVH6 421 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 AURKAIP1Q9NWT8 199 aaPredicted RBP7.58□□□□□ -1.2
UBE4B-204ENST00000462658 SLC45A2Q9UMX9 530 aa7.58□□□□□ -1.2
UBE4B-204ENST00000462658 USP15Q9Y4E8 981 aaPredicted RBP7.58□□□□□ -1.2
UBE4B-204ENST00000462658 UQCRHLA0A096LP55 91 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 OR6C75A6NL08 312 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 EFCAB8A8MWE9 144 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 F8VP50 259 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 CTIFO43310 598 aaKnown RBP7.57□□□□□ -1.2
UBE4B-204ENST00000462658 GRAP2O75791 330 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 UBXN7O94888 489 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 UQCRHP07919 91 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 OR4Q2P0C623 313 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 MTHFD1P11586 935 aaKnown RBP7.57□□□□□ -1.2
UBE4B-204ENST00000462658 PDGFRAP16234 1089 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 CACNA2D1P54289 1103 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 RWDD2BP57060 319 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 OGDHQ02218 1023 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 SLC39A12Q504Y0 691 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 PDCD4Q53EL6 469 aaKnown RBP7.57□□□□□ -1.2
UBE4B-204ENST00000462658 EFHC1Q5JVL4 640 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 C9orf50Q5SZB4 431 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 ZNF280DQ6N043 979 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 TMEM173Q86WV6 379 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-204ENST00000462658 SPATA2LQ8IUW3 424 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-204ENST00000462658 DENND1CQ8IV53 801 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 RASGEF1CQ8N431 466 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 EMC1Q8N766 993 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 NIPA2Q8N8Q9 360 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 ZMIZ2Q8NF64 920 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 TTC8Q8TAM2 541 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 TBC1D15Q8TC07 691 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 ACTRT1Q8TDG2 376 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 CLEC4CQ8WTT0 213 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 RXFP2Q8WXD0 754 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 KRT35Q92764 455 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 SMARCD1Q96GM5 515 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 IGSF21Q96ID5 467 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 PIWIL1Q96J94 861 aaKnown RBP7.57□□□□□ -1.2
UBE4B-204ENST00000462658 RPGRIP1Q96KN7 1286 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 B3GALT6Q96L58 329 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 ZNF558Q96NG5 402 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 KCNK16Q96T55 309 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 YME1L1Q96TA2 773 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 TTPALQ9BTX7 342 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 CARD9Q9H257 536 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 CSNK1G1Q9HCP0 422 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 DMAP1Q9NPF5 467 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-204ENST00000462658 SLAMF7Q9NQ25 335 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 ASNSD1Q9NWL6 643 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 SMARCAL1Q9NZC9 954 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 EHD2Q9NZN4 543 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 FAM30AQ9NZY2 134 aa7.57□□□□□ -1.2
UBE4B-204ENST00000462658 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.57□□□□□ -1.2
UBE4B-204ENST00000462658 MYH10P35580 1976 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms