RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 TEX33O43247 280 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 CREB3O43889 395 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 RAD1O60671 282 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 PRAMEF11O60813 436 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 GADD45BO75293 160 aaPredicted RBP10.86□□□□□ -0.67
CBX3-205ENST00000462165 ECEL1O95672 775 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 CEACAM5P06731 702 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 MYCLP1P12525 358 aaPredicted RBP10.86□□□□□ -0.67
CBX3-205ENST00000462165 GPD1P21695 349 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 CSTF2P33240 577 aaKnown RBP eCLIP10.86□□□□□ -0.67
CBX3-205ENST00000462165 RFC1P35251 1148 aaPredicted RBP10.86□□□□□ -0.67
CBX3-205ENST00000462165 RGRP47804 291 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 NDST2P52849 883 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 AIF1P55008 147 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 POLR2LP62875 67 aaKnown RBP10.86□□□□□ -0.67
CBX3-205ENST00000462165 FMO1Q01740 532 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 CDR2Q01850 454 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 ILF3Q12906 894 aaKnown RBP eCLIP10.86□□□□□ -0.671e-7■■■■□ 21.9
CBX3-205ENST00000462165 PTP4A2Q12974 167 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 TPD52L1Q16890 204 aaPredicted RBP10.86□□□□□ -0.67
CBX3-205ENST00000462165 WDR59Q6PJI9 974 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 SRLQ86TD4 932 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 FAM114A1Q8IWE2 563 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 NAGSQ8N159 534 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 FAM26EQ8N5C1 309 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 TSEN2Q8NCE0 465 aaKnown RBP10.86□□□□□ -0.67
CBX3-205ENST00000462165 SLC30A5Q8TAD4 765 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 C9orf43Q8TAL5 461 aaPredicted RBP10.86□□□□□ -0.67
CBX3-205ENST00000462165 ART4Q93070 314 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 DPYSL5Q9BPU6 564 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 C11orf70Q9BRQ4 267 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 TRNAU1APQ9NX07 287 aaKnown RBP10.86□□□□□ -0.67
CBX3-205ENST00000462165 SLC39A1Q9NY26 324 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 DONSONQ9NYP3 566 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 TAAR2Q9P1P5 351 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 FZD10Q9ULW2 581 aa10.86□□□□□ -0.67
CBX3-205ENST00000462165 IGHV1OR21-1A0A087WYE8 117 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 B4E171 279 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 TRAFD1O14545 582 aaPredicted RBP10.85□□□□□ -0.67
CBX3-205ENST00000462165 PPM1DO15297 605 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 FGF10O15520 208 aaPredicted RBP10.85□□□□□ -0.67
CBX3-205ENST00000462165 FUCA1P04066 466 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 UNGP13051 313 aaPredicted RBP10.85□□□□□ -0.67
CBX3-205ENST00000462165 CHRNB2P17787 502 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 AK4P27144 223 aaPredicted RBP10.85□□□□□ -0.67
CBX3-205ENST00000462165 CSF2RBP32927 897 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 HTR7P34969 479 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 TSPAN7P41732 249 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 RAB15P59190 212 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 BCL2L1Q07817 233 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 MMRN1Q13201 1228 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 PEX6Q13608 980 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 NCAPHQ15003 741 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 ACOX1Q15067 660 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 DCAF12Q5T6F0 453 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 NKAIN2Q5VXU1 208 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 TRIM72Q6ZMU5 477 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 BMPERQ8N8U9 685 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 MLKLQ8NB16 471 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 PATE1Q8WXA2 126 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 COQ10AQ96MF6 247 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 PSMG3-AS1Q96PY0 264 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 TEFMQ96QE5 360 aaKnown RBP10.85□□□□□ -0.67
CBX3-205ENST00000462165 SELENOOQ9BVL4 669 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 TEX101Q9BY14 249 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 FRMD8Q9BZ67 464 aaPredicted RBP10.85□□□□□ -0.67
CBX3-205ENST00000462165 SPRY4Q9C004 299 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 PHPT1Q9NRX4 125 aaPredicted RBP10.85□□□□□ -0.67
CBX3-205ENST00000462165 OCIAD1Q9NX40 245 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 KCTD5Q9NXV2 234 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 PDP2Q9P2J9 529 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 PILRAQ9UKJ1 303 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 ST14Q9Y5Y6 855 aa10.85□□□□□ -0.67
CBX3-205ENST00000462165 USP9XQ93008 2570 aaPredicted RBP10.84□□□□□ -0.67
CBX3-205ENST00000462165 ARHGAP42A6NI28 874 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 SIGLEC16A6NMB1 481 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 EFCAB7A8K855 629 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 NKX2-8O15522 239 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 CCP110O43303 1012 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 DUX1O43812 170 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 PALMO75781 387 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 MAP4P27816 1152 aaKnown RBP10.84□□□□□ -0.67
CBX3-205ENST00000462165 GNPDA1P46926 289 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 PAPOLAP51003 745 aaKnown RBP10.84□□□□□ -0.67
CBX3-205ENST00000462165 GPLD1P80108 840 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 NSUN2Q08J23 767 aaKnown RBP eCLIP10.84□□□□□ -0.67
CBX3-205ENST00000462165 CDC20Q12834 499 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 BIRC2Q13490 618 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 SCYL2Q6P3W7 929 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 TMEM71Q6P5X7 295 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 SLC30A9Q6PML9 568 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 HEATR4Q86WZ0 1026 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 NLGN4XQ8N0W4 816 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 C3orf20Q8ND61 904 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 NLGN4YQ8NFZ3 816 aaPredicted RBP10.84□□□□□ -0.67
CBX3-205ENST00000462165 NUS1Q96E22 293 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 ABHD17AQ96GS6 310 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 EFHD1Q9BUP0 239 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 SLC39A8Q9C0K1 460 aa10.84□□□□□ -0.67
CBX3-205ENST00000462165 SUDS3Q9H7L9 328 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms