RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ETV3P41162 512 aa18.96■□□□□ 0.63
VARS-220ENST00000461874 GABREP78334 506 aa18.96■□□□□ 0.63
VARS-220ENST00000461874 IFI16Q16666 785 aaKnown RBP18.96■□□□□ 0.63
VARS-220ENST00000461874 DENND2CQ68D51 928 aa18.96■□□□□ 0.63
VARS-220ENST00000461874 ALG1LQ6GMV1 187 aa18.96■□□□□ 0.63
VARS-220ENST00000461874 TIGD7Q6NT04 549 aaPredicted RBP18.96■□□□□ 0.63
VARS-220ENST00000461874 LRRC69Q6ZNQ3 347 aa18.96■□□□□ 0.63
VARS-220ENST00000461874 LSMEM2Q8N112 164 aa18.96■□□□□ 0.63
VARS-220ENST00000461874 PQLC3Q8N755 202 aa18.96■□□□□ 0.63
VARS-220ENST00000461874 WDR48Q8TAF3 677 aa18.96■□□□□ 0.63
VARS-220ENST00000461874 DTD2Q96FN9 168 aa18.96■□□□□ 0.63
VARS-220ENST00000461874 ZNF578Q96N58 590 aaPredicted RBP18.96■□□□□ 0.63
VARS-220ENST00000461874 POLR1EQ9GZS1 481 aaKnown RBP18.96■□□□□ 0.63
VARS-220ENST00000461874 TSPY26PQ9H489 355 aa18.96■□□□□ 0.63
VARS-220ENST00000461874 POLR1BQ9H9Y6 1135 aa18.96■□□□□ 0.63
VARS-220ENST00000461874 MRPL40Q9NQ50 206 aaKnown RBP18.96■□□□□ 0.63
VARS-220ENST00000461874 ATRXP46100 2492 aa18.96■□□□□ 0.63
VARS-220ENST00000461874 CASC3O15234 703 aaKnown RBP18.95■□□□□ 0.62
VARS-220ENST00000461874 FZD6O60353 706 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 MAP3K6O95382 1288 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 PDHA1P08559 390 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 TPM1P09493 284 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 HOXB3P14651 431 aaPredicted RBP18.95■□□□□ 0.62
VARS-220ENST00000461874 CES1P23141 567 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 GBE1Q04446 702 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 ITKQ08881 620 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 PTPRRQ15256 657 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 TSR1Q2NL82 804 aaKnown RBP18.95■□□□□ 0.62
VARS-220ENST00000461874 USP45Q70EL2 814 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 TSPAN33Q86UF1 283 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 RAPGEF5Q92565 580 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 ATXN7L3BQ96GX2 97 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 CRELD1Q96HD1 420 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 CHP1Q99653 195 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 TEX101Q9BY14 249 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 CYP4F12Q9HCS2 524 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 ABHD10Q9NUJ1 306 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 RBM22Q9NW64 420 aaKnown RBP eCLIP18.95■□□□□ 0.625e-6■■■□□ 17
VARS-220ENST00000461874 AMACRQ9UHK6 382 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 ENTPD2Q9Y5L3 495 aa18.95■□□□□ 0.62
VARS-220ENST00000461874 IGSF10Q6WRI0 2623 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 PTPRQQ9UMZ3 2332 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 A0A1W2PNU3 283 aaPredicted RBP18.94■□□□□ 0.62
VARS-220ENST00000461874 NTN3O00634 580 aaPredicted RBP18.94■□□□□ 0.62
VARS-220ENST00000461874 MFAP3LO75121 409 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 MYCLP1P12525 358 aaPredicted RBP18.94■□□□□ 0.62
VARS-220ENST00000461874 KRT10P13645 584 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 CTPS1P17812 591 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 MX2P20592 715 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 KDELR1P24390 212 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 SLC10A2Q12908 348 aaPredicted RBP18.94■□□□□ 0.62
VARS-220ENST00000461874 ARHGEF7Q14155 803 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 IHHQ14623 411 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 MESDQ14696 234 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 OGFOD3Q6PK18 319 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 Q6ZVL8 140 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 TECPR1Q7Z6L1 1165 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 TAF8Q7Z7C8 310 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 HEATR4Q86WZ0 1026 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 NDUFAF2Q8N183 169 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 GPR156Q8NFN8 814 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 SLC35G2Q8TBE7 412 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 CCDC74AQ96AQ1 378 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 TMEM168Q9H0V1 697 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 PHPT1Q9NRX4 125 aaPredicted RBP18.94■□□□□ 0.62
VARS-220ENST00000461874 RABGEF1Q9UJ41 708 aa18.94■□□□□ 0.62
VARS-220ENST00000461874 PRSS38A1L453 326 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 CCNB1P14635 433 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 TEAD1P28347 426 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 ERVPABLB-1P60509 514 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 DSC2Q02487 901 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 SPIDRQ14159 915 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 ZFYVE27Q5T4F4 411 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 IGF2-ASQ6U949 168 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 FAM46DQ8NEK8 389 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 OR6C4Q8NGE1 309 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 ARRDC2Q8TBH0 407 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 LRRN4Q8WUT4 740 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 HIC2Q96JB3 615 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 CCDC42Q96M95 316 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 RNF157Q96PX1 679 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 NHEJ1Q9H9Q4 299 aaPredicted RBP18.93■□□□□ 0.62
VARS-220ENST00000461874 SPTLC3Q9NUV7 552 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 DTLQ9NZJ0 730 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 MOSPD1Q9UJG1 213 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 SATB2Q9UPW6 733 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 LOC400499M0QZD8 3231 aa18.93■□□□□ 0.62
VARS-220ENST00000461874 LRP4O75096 1905 aa18.92■□□□□ 0.62
VARS-220ENST00000461874 SHROOM3Q8TF72 1996 aa18.92■□□□□ 0.62
VARS-220ENST00000461874 A0A0J9YYE9 177 aa18.92■□□□□ 0.62
VARS-220ENST00000461874 A0A0U1RQS6 177 aa18.92■□□□□ 0.62
VARS-220ENST00000461874 MTA2O94776 668 aa18.92■□□□□ 0.62
VARS-220ENST00000461874 TRBC1P01850 177 aa18.92■□□□□ 0.62
VARS-220ENST00000461874 CEACAM5P06731 702 aa18.92■□□□□ 0.62
VARS-220ENST00000461874 ARHGAP25P42331 645 aa18.92■□□□□ 0.62
VARS-220ENST00000461874 PDX1P52945 283 aa18.92■□□□□ 0.62
VARS-220ENST00000461874 CDK3Q00526 305 aa18.92■□□□□ 0.62
VARS-220ENST00000461874 DPTQ07507 201 aa18.92■□□□□ 0.62
VARS-220ENST00000461874 NIPAL4Q0D2K0 466 aa18.92■□□□□ 0.62
VARS-220ENST00000461874 CCDC173Q0VFZ6 552 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms