RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 INSM1Q01101 510 aaPredicted RBP15.41■□□□□ 0.06
VARS-219ENST00000461328 KIF5AQ12840 1032 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 MTM1Q13496 603 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 C1orf61Q13536 156 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 CNGA3Q16281 694 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 B4GALNT4Q76KP1 1039 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 LPCAT1Q8NF37 534 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 ATL2Q8NHH9 583 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 EXD1Q8NHP7 514 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 KIAA1524Q8TCG1 905 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 TFB1MQ8WVM0 346 aaKnown RBP15.41■□□□□ 0.06
VARS-219ENST00000461328 SPOCK2Q92563 424 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 P3H4Q92791 437 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 NXPE2Q96DL1 559 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 TBATAQ96M53 351 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 AGAP3Q96P47 875 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 APOOQ9BUR5 198 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 LRRC61Q9BV99 259 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 TDRD1Q9BXT4 1180 aaKnown RBP15.41■□□□□ 0.06
VARS-219ENST00000461328 USP29Q9HBJ7 922 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 GOLGA6AQ9NYA3 693 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 NCKIPSDQ9NZQ3 722 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 SAE1Q9UBE0 346 aaPredicted RBP15.41■□□□□ 0.06
VARS-219ENST00000461328 CHKBQ9Y259 395 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 OR1A2Q9Y585 309 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 CACNB4O00305 520 aaPredicted RBP15.4■□□□□ 0.06
VARS-219ENST00000461328 TPP1O14773 563 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 GCATO75600 419 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 RASGRP1O95267 797 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 ANXA6P08133 673 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 PDHA1P08559 390 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 PECAM1P16284 738 aaPredicted RBP15.4■□□□□ 0.06
VARS-219ENST00000461328 CTNNA1P35221 906 aaKnown RBP15.4■□□□□ 0.06
VARS-219ENST00000461328 CETN2P41208 172 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 CYP4F3Q08477 520 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 NIPAL4Q0D2K0 466 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 TAZQ16635 292 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 ENPP7Q6UWV6 458 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 ZC3H18Q86VM9 953 aaKnown RBP15.4■□□□□ 0.06
VARS-219ENST00000461328 HID1Q8IV36 788 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 ARRDC2Q8TBH0 407 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 HEMGNQ9BXL5 484 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 PCDH9Q9HC56 1237 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 KLQ9UEF7 1012 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 PNMA8BQ9ULN7 279 aaPredicted RBP15.4■□□□□ 0.06
VARS-219ENST00000461328 DOLKQ9UPQ8 538 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 CLCA2Q9UQC9 943 aa15.4■□□□□ 0.06
VARS-219ENST00000461328 LRRK1Q38SD2 2015 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 LY6G6EA0A0G2JKS1 128 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 CCDC66A2RUB6 948 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 GRID2IPA4D2P6 1211 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 LMO7DNF2Z398 122 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 PJA2O43164 708 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 PTMAP06454 111 aaKnown RBP15.39■□□□□ 0.05
VARS-219ENST00000461328 GP1BAP07359 652 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 CTSEP14091 401 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 TSHRP16473 764 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 LHCGRP22888 699 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 CTNNA2P26232 953 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 HK3P52790 923 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 PTPRRQ15256 657 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 ELOCQ15369 112 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 NR0B2Q15466 257 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 TCEA2Q15560 299 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 PPP2R5EQ16537 467 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 CDKN3Q16667 212 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 ALG11Q2TAA5 492 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 LRRC66Q68CR7 880 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 RD3Q7Z3Z2 195 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 TSPAN33Q86UF1 283 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 SYCE1Q8N0S2 351 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 PLA2G15Q8NCC3 412 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 IFI44Q8TCB0 444 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 PIH1D2Q8WWB5 315 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 GLMNQ92990 594 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 TSACCQ96A04 125 aaPredicted RBP15.39■□□□□ 0.05
VARS-219ENST00000461328 SCRN2Q96FV2 425 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 COQ10AQ96MF6 247 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 WDR92Q96MX6 357 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 MCCC1Q96RQ3 725 aaPredicted RBP15.39■□□□□ 0.05
VARS-219ENST00000461328 ABCG4Q9H172 646 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 WDR26Q9H7D7 661 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 KCTD5Q9NXV2 234 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 DKK4Q9UBT3 224 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 TRIM10Q9UDY6 481 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 AMFRQ9UKV5 643 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 DNPEPQ9ULA0 475 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 U3KQA8 63 aa15.39■□□□□ 0.05
VARS-219ENST00000461328 GOLGA4Q13439 2230 aaKnown RBP15.38■□□□□ 0.05
VARS-219ENST00000461328 A0A0J9YYE9 177 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 CPED1A4D0V7 1026 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 CAPN8A6NHC0 703 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 PSMD11O00231 422 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 MTSS1O43312 755 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 OPA1O60313 960 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 FZD6O60353 706 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 TRBC1P01850 177 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 ETV3P41162 512 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 RPIAP49247 311 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 RWDD2BP57060 319 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms