RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 DMAC2Q9NW81 257 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 SPATA7Q9P0W8 599 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 DKK3Q9UBP4 350 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 CDH22Q9UJ99 828 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 GPR52Q9Y2T5 361 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 INSL6Q9Y581 213 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 GMEB1Q9Y692 573 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 MYO15AQ9UKN7 3530 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 FAM208BQ5VWN6 2430 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 MAP1BP46821 2468 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 FAM170AA1A519 330 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 LRRIQ3A6PVS8 624 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 HIDE1A8MVS5 230 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 H0YCG3 227 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 PDXKO00764 312 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 PER2O15055 1255 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 LINC01565O15544 149 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 ADAM12O43184 909 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 THAP12O43422 761 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 EXTL3O43909 919 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 CEP104O60308 925 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 CALCAP01258 141 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 MT-ND5P03915 603 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 SPATA31D3P0C874 917 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 IDO1P14902 403 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 EZRP15311 586 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 FERP16591 822 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 NR2F2P24468 414 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 OAS2P29728 719 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 SLC8A1P32418 973 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 CA8P35219 290 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 ADRA1BP35368 520 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 GCLMP48507 274 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 CYP24A1Q07973 514 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 DSC1Q08554 894 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 GPM6BQ13491 265 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 RAB30Q15771 203 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 ZBTB6Q15916 424 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 SNRNP35Q16560 246 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 CLPPQ16740 277 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 PFKFB4Q16877 469 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 LRRC23Q53EV4 343 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 SLC44A4Q53GD3 710 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 CCDC92Q53HC0 331 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 XKR4Q5GH76 650 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 CCDC183Q5T5S1 534 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 MFSD4BQ5TF39 518 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 SFMBT2Q5VUG0 894 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 PLPP4Q5VZY2 271 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 NUGGCQ68CJ6 796 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 CENPPQ6IPU0 288 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 SPOPLQ6IQ16 392 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 TTI2Q6NXR4 508 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 PRSS55Q6UWB4 352 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 LRRC31Q6UY01 552 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 RBM43Q6ZSC3 357 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 SPATA31D4Q6ZUB0 917 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 ARHGAP22Q7Z5H3 698 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 ADGRD2Q7Z7M1 963 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 RBM23Q86U06 439 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 LRRC49Q8IUZ0 686 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 BRSK2Q8IWQ3 736 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 CMTM4Q8IZR5 234 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 SLC39A11Q8N1S5 342 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 LRRC43Q8N309 656 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 GPD1LQ8N335 351 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF276Q8N554 614 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 SMYD1Q8NB12 490 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 XXYLT1Q8NBI6 393 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 CCDC150Q8NCX0 1101 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 SPPL3Q8TCT6 385 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 URGCPQ8TCY9 931 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 MUL1Q969V5 352 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 CCDC47Q96A33 483 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 HVCN1Q96D96 273 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 RSRC1Q96IZ7 334 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 FAM81BQ96LP2 452 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 ALS2CR12Q96Q35 445 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 GSDMAQ96QA5 445 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 NAP1L3Q99457 506 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 PI4K2AQ9BTU6 479 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 STK33Q9BYT3 514 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF518BQ9C0D4 1074 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 RABEP2Q9H5N1 569 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 TMEM206Q9H813 350 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 BRD9Q9H8M2 597 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 SAMSN1Q9NSI8 373 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 RBAKQ9NYW8 714 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 CFAP97Q9P2B7 532 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 NCDNQ9UBB6 729 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF69Q9UC07 566 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 SLC23A1Q9UHI7 598 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 SIX4Q9UIU6 781 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 ADAM21Q9UKJ8 722 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 EXOC7Q9UPT5 735 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 MAN2B2Q9Y2E5 1009 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 NME7Q9Y5B8 376 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 FLNBO75369 2602 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 RALGAPA2Q2PPJ7 1873 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 880.8 ms