RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CBX5P45973 191 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 IFNAR2P48551 515 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 TMED10P49755 219 aaKnown RBP10.43□□□□□ -0.74
HERC4-207ENST00000460168 PPP2R2AP63151 447 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 CD83Q01151 205 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 PPARDQ03181 441 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 MYLK3Q32MK0 819 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 CNPY1Q3B7I2 92 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 RNF219Q5W0B1 726 aaPredicted RBP10.43□□□□□ -0.74
HERC4-207ENST00000460168 PPP4R4Q6NUP7 873 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 KDM7AQ6ZMT4 941 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 CCNJLQ8IV13 435 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 CTAGE3PQ8IX95 158 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 BBS5Q8N3I7 341 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 TDRD5Q8NAT2 981 aaKnown RBP10.43□□□□□ -0.74
HERC4-207ENST00000460168 SH3RF2Q8TEC5 729 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 ATL1Q8WXF7 558 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 NXPE3Q969Y0 559 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 INTS12Q96CB8 462 aaKnown RBP10.43□□□□□ -0.74
HERC4-207ENST00000460168 FERD3LQ96RJ6 166 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 TBL1YQ9BQ87 522 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 NAT9Q9BTE0 207 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 PRKD2Q9BZL6 878 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 SLC25A51Q9H1U9 297 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 NKX2-4Q9H2Z4 354 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 SLC28A3Q9HAS3 691 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 FETUBQ9UGM5 382 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 LGALS13Q9UHV8 139 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 ARHGAP26Q9UNA1 814 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 TBC1D30Q9Y2I9 924 aa10.43□□□□□ -0.74
HERC4-207ENST00000460168 IQANK1A0A1B0GTG1 560 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 POLBP06746 335 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 GSTA1P08263 222 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 PGAM1P18669 254 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 KRT15P19012 456 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 GCAP28676 217 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 HMOX2P30519 316 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 NTHL1P78549 312 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 TMEM259Q4ZIN3 620 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 IGSF11Q5DX21 431 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 CXorf57Q6NSI4 855 aaKnown RBP10.42□□□□□ -0.74
HERC4-207ENST00000460168 TPGS1Q6ZTW0 290 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 KDELC2Q7Z4H8 507 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 TDRPQ86YL5 185 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 CCDC117Q8IWD4 279 aaPredicted RBP10.42□□□□□ -0.74
HERC4-207ENST00000460168 TEX26Q8N6G2 289 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 GDPD5Q8WTR4 605 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 IPCEF1Q8WWN9 437 aaPredicted RBP10.42□□□□□ -0.74
HERC4-207ENST00000460168 NRBF2Q96F24 287 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 ZNF599Q96NL3 588 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 FICDQ9BVA6 458 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 NUF2Q9BZD4 464 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 POLR1EQ9GZS1 481 aaKnown RBP10.42□□□□□ -0.74
HERC4-207ENST00000460168 TASP1Q9H6P5 420 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 PPANQ9NQ55 473 aaKnown RBP10.42□□□□□ -0.74
HERC4-207ENST00000460168 THAP1Q9NVV9 213 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 EVLQ9UI08 416 aaPredicted RBP10.42□□□□□ -0.74
HERC4-207ENST00000460168 CCL26Q9Y258 94 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 CHD5Q8TDI0 1954 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 ANKRD34BA5PLL1 514 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 ASMTLO95671 621 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 FAM107AO95990 144 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 INHBAP08476 426 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 ACADSP16219 412 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 GLDCP23378 1020 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 CD86P42081 329 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 NRIP1P48552 1158 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 RAB15P59190 212 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 RUNX1T1Q06455 604 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 RAB30Q15771 203 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 TNFAIP8L3Q5GJ75 292 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 CERCAMQ5T4B2 595 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 COL13A1Q5TAT6 717 aaPredicted RBP10.42□□□□□ -0.74
HERC4-207ENST00000460168 FCRLBQ6BAA4 426 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 FAM217AQ8IXS0 508 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 SRRM1Q8IYB3 904 aaKnown RBP10.42□□□□□ -0.74
HERC4-207ENST00000460168 CYP4X1Q8N118 509 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 MDM1Q8TC05 714 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 IMP4Q96G21 291 aaKnown RBP10.42□□□□□ -0.74
HERC4-207ENST00000460168 SELENOSQ9BQE4 189 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 IL22Q9GZX6 179 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 PDFQ9HBH1 243 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 TDP1Q9NUW8 608 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 PLK2Q9NYY3 685 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 UBA2Q9UBT2 640 aaPredicted RBP10.42□□□□□ -0.74
HERC4-207ENST00000460168 VPS28Q9UK41 221 aa10.42□□□□□ -0.74
HERC4-207ENST00000460168 HELZP42694 1942 aaKnown RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 FOXO6A8MYZ6 492 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 ZNF197O14709 1029 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 KDELR3O43731 214 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 MOSPD3O75425 235 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 FKBP9O95302 570 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 TPH1P17752 444 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 NPY2RP49146 381 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 DSC2Q02487 901 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 RELQ04864 619 aaPredicted RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 TRAP1Q12931 704 aaKnown RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 FSCBQ5H9T9 825 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 TRMT10BQ6PF06 316 aaKnown RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 ZNF783Q6ZMS7 281 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms