RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 LSM14AQ8ND56 463 aaKnown RBP22.8■■□□□ 1.24
PTPN4-207ENST00000460162 DTD2Q96FN9 168 aa22.8■■□□□ 1.24
PTPN4-207ENST00000460162 GFM1Q96RP9 751 aaKnown RBP22.8■■□□□ 1.24
PTPN4-207ENST00000460162 MCCC1Q96RQ3 725 aaPredicted RBP22.8■■□□□ 1.24
PTPN4-207ENST00000460162 LGR4Q9BXB1 951 aa22.8■■□□□ 1.24
PTPN4-207ENST00000460162 MRPL40Q9NQ50 206 aaKnown RBP22.8■■□□□ 1.24
PTPN4-207ENST00000460162 PHPT1Q9NRX4 125 aaPredicted RBP22.8■■□□□ 1.24
PTPN4-207ENST00000460162 CDRT15L2A8MXV6 281 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 TMX2-CTNND1H3BSU7 103 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 CASC3O15234 703 aaKnown RBP22.79■■□□□ 1.24
PTPN4-207ENST00000460162 MFSD11O43934 449 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 PGLSO95336 258 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 RPLP0P05388 317 aaKnown RBP22.79■■□□□ 1.24
PTPN4-207ENST00000460162 LHCGRP22888 699 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 NFKBIBQ15653 356 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 ARMC12Q5T9G4 340 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 OGFOD3Q6PK18 319 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 USP45Q70EL2 814 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 CLEC14AQ86T13 490 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 PELI3Q8N2H9 469 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 ZNF564Q8TBZ8 553 aaPredicted RBP22.79■■□□□ 1.24
PTPN4-207ENST00000460162 CPLX3Q8WVH0 158 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 CCDC97Q96F63 343 aaPredicted RBP22.79■■□□□ 1.24
PTPN4-207ENST00000460162 SCRN2Q96FV2 425 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 TEX101Q9BY14 249 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 TMEM168Q9H0V1 697 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 CYP4F12Q9HCS2 524 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 APPL1Q9UKG1 709 aa22.79■■□□□ 1.24
PTPN4-207ENST00000460162 NPIPB15A6NHN6 443 aaPredicted RBP22.78■■□□□ 1.24
PTPN4-207ENST00000460162 NOBOXO60393 691 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 ITGA2BP08514 1039 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 PNLIPP16233 465 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 GLB1P16278 677 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 IL4RP24394 825 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 TEAD1P28347 426 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 C14orf28Q4W4Y0 310 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 CCDC122Q5T0U0 273 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 CERCAMQ5T4B2 595 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 HEATR4Q86WZ0 1026 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 TEX26Q8N6G2 289 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 FAM46DQ8NEK8 389 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 ZNF670Q9BS34 389 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 POLR1EQ9GZS1 481 aaKnown RBP22.78■■□□□ 1.24
PTPN4-207ENST00000460162 NENFQ9UMX5 172 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 PPIL1Q9Y3C6 166 aa22.78■■□□□ 1.24
PTPN4-207ENST00000460162 KALRNO60229 2985 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 MGAQ8IWI9 3026 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 A0A1W2PQM1 296 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 PMS2P1A4D2B8 440 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 KLK10O43240 276 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 CD48P09326 243 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 KRT10P13645 584 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 CCKBRP32239 447 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 GARSP41250 739 aaKnown RBP22.77■■□□□ 1.24
PTPN4-207ENST00000460162 SSR1P43307 286 aaKnown RBP22.77■■□□□ 1.24
PTPN4-207ENST00000460162 ARSEP51690 589 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 CCL7P80098 99 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 GALNT2Q10471 571 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 MMRN1Q13201 1228 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 ARHGEF7Q14155 803 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 DPYSL3Q14195 570 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 PAFAH1B3Q15102 231 aaKnown RBP22.77■■□□□ 1.24
PTPN4-207ENST00000460162 NCBP2-AS2Q69YL0 99 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 ALG1LQ6GMV1 187 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 TIGD7Q6NT04 549 aaPredicted RBP22.77■■□□□ 1.24
PTPN4-207ENST00000460162 FOXR1Q6PIV2 292 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 HSD11B1LQ7Z5J1 315 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 B3GNT8Q7Z7M8 397 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 CCNJLQ8IV13 435 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 CBARPQ8N350 705 aaPredicted RBP22.77■■□□□ 1.24
PTPN4-207ENST00000460162 KIAA1524Q8TCG1 905 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 TMEM74Q96NL1 305 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 STRADBQ9C0K7 418 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 LRRN3Q9H3W5 708 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 EPB41L5Q9HCM4 733 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 NT5MQ9NPB1 228 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 HAUS2Q9NVX0 235 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 IFNKQ9P0W0 207 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 LCMT1Q9UIC8 334 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 MOSPD1Q9UJG1 213 aa22.77■■□□□ 1.24
PTPN4-207ENST00000460162 ARHGEF17Q96PE2 2063 aaPredicted RBP22.77■■□□□ 1.23
PTPN4-207ENST00000460162 SCN8AQ9UQD0 1980 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 B4DGG1 531 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 TNFSF15O95150 251 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 ETV3P41162 512 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 INHBCP55103 352 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 CDK3Q00526 305 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 HLTFQ14527 1009 aaKnown RBP eCLIP22.76■■□□□ 1.23
PTPN4-207ENST00000460162 DENND2CQ68D51 928 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 SPECC1LQ69YQ0 1117 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 NDUFAF2Q8N183 169 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 SLC39A7Q92504 469 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 MAML1Q92585 1016 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 FATE1Q969F0 183 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 SEMA3CQ99985 751 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 FRMD8Q9BZ67 464 aaPredicted RBP22.76■■□□□ 1.23
PTPN4-207ENST00000460162 DPEP2Q9H4A9 486 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 CARS2Q9HA77 564 aaKnown RBP22.76■■□□□ 1.23
PTPN4-207ENST00000460162 UVRAGQ9P2Y5 699 aa22.76■■□□□ 1.23
PTPN4-207ENST00000460162 AMACRQ9UHK6 382 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms