RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 NAB1Q13506 487 aa9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 SNCBQ16143 134 aa9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 CES4AQ5XG92 561 aa9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 CRIPAKQ8N1N5 446 aa9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 ANKRD49Q8WVL7 239 aa9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.37□□□□□ -0.913e-9■■■■■ 78.5
NUDCD3-203ENST00000460110 TSPAN17Q96FV3 270 aa9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 NSL1Q96IY1 281 aa9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 GPR21Q99679 349 aa9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 GPR22Q99680 433 aa9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 EGFL8Q99944 293 aa9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 MRPL46Q9H2W6 279 aaKnown RBP9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 SLC24A3Q9HC58 644 aa9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 MID2Q9UJV3 735 aa9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 RALGAPA2Q2PPJ7 1873 aa9.37□□□□□ -0.91
NUDCD3-203ENST00000460110 BTN3A1O00481 513 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 KPNA3O00505 521 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 PFDN6O15212 129 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 RPP40O75818 363 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 CLDN7O95471 211 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 PRAMEF12O95522 483 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 IGLV3-27P01718 113 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 FGF3P11487 239 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 GRK2P25098 689 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 KPNA2P52292 529 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 RAD51Q06609 339 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 MPPE1Q53F39 396 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 TMEM240Q5SV17 173 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 CXorf57Q6NSI4 855 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 LAYNQ6UX15 382 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 SH2D5Q6ZV89 423 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 TMEM150AQ86TG1 271 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 SETD3Q86TU7 594 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 CILP2Q8IUL8 1156 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 RNF148Q8N7C7 305 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 PBXIP1Q96AQ6 731 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 FEM1CQ96JP0 617 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 CATSPER2Q96P56 530 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 IL21Q9HBE4 155 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 TDP1Q9NUW8 608 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 WASH4PA8MWX3 477 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 SPECC1L-ADORA2AF8WAN1 911 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 LDB2O43679 373 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 UNC5CO95185 931 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 BAG2O95816 211 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 DLDP09622 509 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 CRABP2P29373 138 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 WASP42768 502 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 ARCN1P48444 511 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 CDKN2DP55273 166 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 C1QTNF8P60827 252 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 CUL3Q13618 768 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 RPS6KA2Q15349 733 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 TMEM198Q66K66 360 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 MBLAC2Q68D91 279 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 PAQR3Q6TCH7 311 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 FRA10AC1Q70Z53 315 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 GET4Q7L5D6 327 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 MFSD6LQ8IWD5 586 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 PARP9Q8IXQ6 854 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 MRPL43Q8N983 215 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 ZNF689Q96CS4 500 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 HBEGFQ99075 208 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 ZBP1Q9H171 429 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 COG4Q9H9E3 785 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 CD274Q9NZQ7 290 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 KIAA1522Q9P206 1035 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 CIDEBQ9UHD4 219 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 TRMT6Q9UJA5 497 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 RNF112Q9ULX5 631 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 LRRC14BA6NHZ5 514 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 DLX3O60479 287 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 SNX2O60749 519 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 XYLBO75191 536 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 MTX2O75431 263 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 IGSF6O95976 241 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 LTA4HP09960 611 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 ATXN1LP0C7T5 689 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 CASP2P42575 452 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 NRIP1P48552 1158 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 SLC18A1P54219 525 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 BNIP1Q12981 228 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 BIRC2Q13490 618 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 GPM6BQ13491 265 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 CLEC6AQ6EIG7 209 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 RAB44Q7Z6P3 723 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 YTHDF3Q7Z739 585 aaKnown RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 MYO19Q96H55 970 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 CLPTM1LQ96KA5 538 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 TBC1D10AQ9BXI6 508 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 SEMA4BQ9NPR2 832 aaPredicted RBP9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 HACD3Q9P035 362 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 SIRPGQ9P1W8 387 aa9.36□□□□□ -0.91
NUDCD3-203ENST00000460110 KIAA0355O15063 1070 aa9.35□□□□□ -0.91
NUDCD3-203ENST00000460110 SMIM24O75264 130 aa9.35□□□□□ -0.91
NUDCD3-203ENST00000460110 FSBPO95073 299 aa9.35□□□□□ -0.91
NUDCD3-203ENST00000460110 RPSAP08865 295 aaKnown RBP9.35□□□□□ -0.91
NUDCD3-203ENST00000460110 DHRS4L1P0CG22 281 aa9.35□□□□□ -0.91
NUDCD3-203ENST00000460110 TYRP14679 529 aa9.35□□□□□ -0.91
NUDCD3-203ENST00000460110 DNAJB1P25685 340 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms