RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ILF3Q12906 894 aaKnown RBP eCLIP10.44□□□□□ -0.74
HDLBP-227ENST00000458564 SQSTM1Q13501 440 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 CLCA4Q14CN2 919 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 FKBP15Q5T1M5 1219 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 ZNF574Q6ZN55 896 aaPredicted RBP10.44□□□□□ -0.74
HDLBP-227ENST00000458564 NRROSQ86YC3 692 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 PELI3Q8N2H9 469 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 NUDT22Q9BRQ3 303 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 CINPQ9BW66 212 aaPredicted RBP10.44□□□□□ -0.74
HDLBP-227ENST00000458564 SLC12A9Q9BXP2 914 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 TEX101Q9BY14 249 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 GSDMCQ9BYG8 508 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 FRMD8Q9BZ67 464 aaPredicted RBP10.44□□□□□ -0.74
HDLBP-227ENST00000458564 CDH19Q9H159 772 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 VPS16Q9H269 839 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 CARS2Q9HA77 564 aaKnown RBP10.44□□□□□ -0.74
HDLBP-227ENST00000458564 PHPT1Q9NRX4 125 aaPredicted RBP10.44□□□□□ -0.74
HDLBP-227ENST00000458564 SPATS2LQ9NUQ6 558 aaKnown RBP10.44□□□□□ -0.74
HDLBP-227ENST00000458564 B4GALT6Q9UBX8 382 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 TUBD1Q9UJT1 453 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 AP4E1Q9UPM8 1137 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.43□□□□□ -0.74
HDLBP-227ENST00000458564 RHPN2P1A8MT19 583 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 EEF2KO00418 725 aaKnown RBP10.43□□□□□ -0.74
HDLBP-227ENST00000458564 SOCS5O75159 536 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 FUCA1P04066 466 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 FGF1P05230 155 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 CEACAM5P06731 702 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 TPM2P07951 284 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 FGF3P11487 239 aaPredicted RBP10.43□□□□□ -0.74
HDLBP-227ENST00000458564 CCL4P13236 92 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 CD1CP29017 333 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 ATP1A2P50993 1020 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 RENBPP51606 427 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 ZNF135P52742 658 aaPredicted RBP10.43□□□□□ -0.74
HDLBP-227ENST00000458564 LIMK2P53671 638 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 OR1D5P58170 312 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 CYP4F2P78329 520 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 PEX6Q13608 980 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 ACOX1Q15067 660 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 SYCP1Q15431 976 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 CNGA3Q16281 694 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 BORAQ6PGQ7 559 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 DCUN1D2Q6PH85 259 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 RFX8Q6ZV50 586 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 HEATR4Q86WZ0 1026 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 PSTKQ8IV42 348 aaKnown RBP10.43□□□□□ -0.74
HDLBP-227ENST00000458564 MCOLN2Q8IZK6 566 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 CBARPQ8N350 705 aaPredicted RBP10.43□□□□□ -0.74
HDLBP-227ENST00000458564 NPWQ8N729 165 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 CCDC112Q8NEF3 446 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 OR4D9Q8NGE8 314 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 ZDHHC1Q8WTX9 485 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 NKD1Q969G9 470 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 NUS1Q96E22 293 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 DTD2Q96FN9 168 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 CCDC74BQ96LY2 380 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 NSMCE3Q96MG7 304 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 ZNF599Q96NL3 588 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 TAAR9Q96RI9 348 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 AGPAT1Q99943 283 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 DPYSL5Q9BPU6 564 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 DDA1Q9BW61 102 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 NUP62CLQ9H1M0 184 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 SP110Q9HB58 689 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 GPATCH2LQ9NWQ4 482 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 TAAR2Q9P1P5 351 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 SEPT3Q9UH03 358 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 SLC17A4Q9Y2C5 497 aa10.43□□□□□ -0.74
HDLBP-227ENST00000458564 DOPEY2Q9Y3R5 2298 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 PSMD11O00231 422 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 TEX33O43247 280 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 HEXIM1O94992 359 aaKnown RBP10.42□□□□□ -0.74
HDLBP-227ENST00000458564 ECEL1O95672 775 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 IVLP07476 585 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 THRAP10827 490 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 ERCC2P18074 760 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 CR2P20023 1033 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 NFKBIAP25963 317 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 ALDH4A1P30038 563 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 VIPR1P32241 457 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 CSF2RBP32927 897 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 HSPA9P38646 679 aaKnown RBP10.42□□□□□ -0.74
HDLBP-227ENST00000458564 HCAR3P49019 387 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 SCNN1BP51168 640 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 CDK3Q00526 305 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 TLE1Q04724 770 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 MAMLD1Q13495 774 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 CA9Q16790 459 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 AMZ1Q400G9 498 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 ERMARDQ5T6L9 678 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 TMCO4Q5TGY1 634 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 PPP1R2P3Q6NXS1 205 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 ARHGAP36Q6ZRI8 547 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 CYP4V2Q6ZWL3 525 aaPredicted RBP10.42□□□□□ -0.74
HDLBP-227ENST00000458564 NAGSQ8N159 534 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 LZTR1Q8N653 840 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 ARFGAP1Q8N6T3 406 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 AGBL5Q8NDL9 886 aa10.42□□□□□ -0.74
HDLBP-227ENST00000458564 RCBTB1Q8NDN9 531 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms