RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 SYNDIG1Q9H7V2 258 aa8.32□□□□□ -1.08
LINC01888-202ENST00000457602 USP29Q9HBJ7 922 aa8.32□□□□□ -1.08
LINC01888-202ENST00000457602 C1GALT1Q9NS00 363 aa8.32□□□□□ -1.08
LINC01888-202ENST00000457602 TMEM248Q9NWD8 314 aa8.32□□□□□ -1.08
LINC01888-202ENST00000457602 ADAM22Q9P0K1 906 aa8.32□□□□□ -1.08
LINC01888-202ENST00000457602 SPASTQ9UBP0 616 aa8.32□□□□□ -1.08
LINC01888-202ENST00000457602 GGT7Q9UJ14 662 aa8.32□□□□□ -1.08
LINC01888-202ENST00000457602 NOCTQ9UK39 431 aaKnown RBP8.32□□□□□ -1.08
LINC01888-202ENST00000457602 APC2O95996 2303 aa8.32□□□□□ -1.08
LINC01888-202ENST00000457602 MYLKQ15746 1914 aa8.32□□□□□ -1.08
LINC01888-202ENST00000457602 CXorf51AA0A1B0GTR3 108 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 ZSCAN5CA6NGD5 496 aaPredicted RBP8.31□□□□□ -1.08
LINC01888-202ENST00000457602 C2CD4BA6NLJ0 364 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 FAM72CH0Y354 149 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 KDELR3O43731 214 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 CREB3O43889 395 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 TM7SF2O76062 418 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 IGSF6O95976 241 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 GSRP00390 522 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 NME1P15531 152 aaKnown RBP8.31□□□□□ -1.08
LINC01888-202ENST00000457602 GPD1P21695 349 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 XPAP23025 273 aaPredicted RBP8.31□□□□□ -1.08
LINC01888-202ENST00000457602 EPHB2P29323 1055 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 STAT1P42224 750 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 PTPN9P43378 593 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 NSFP46459 744 aaKnown RBP8.31□□□□□ -1.08
LINC01888-202ENST00000457602 HDAC4P56524 1084 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 PFN3P60673 137 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 ID3Q02535 119 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 C1orf61Q13536 156 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 PTK2BQ14289 1009 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 NR0B2Q15466 257 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 MSMPQ1L6U9 139 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 MYLK3Q32MK0 819 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 C3orf38Q5JPI3 329 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 LRRC73Q5JTD7 316 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 FAXCQ5TGI0 409 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 FAM72AQ5TYM5 149 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 MANEALQ5VSG8 457 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 CDCP2Q5VXM1 449 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 FAM72DQ6L9T8 149 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 GUSBP11Q6P575 273 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 GDPD4Q6W3E5 623 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 EFL1Q7Z2Z2 1120 aaKnown RBP8.31□□□□□ -1.08
LINC01888-202ENST00000457602 SLFN11Q7Z7L1 901 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 VPS36Q86VN1 386 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 FAM72BQ86X60 149 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 SPACA3Q8IXA5 215 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 RBFAQ8N0V3 343 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 LSMEM2Q8N112 164 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 NETO2Q8NC67 525 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 DENND6BQ8NEG7 585 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 ENOX1Q8TC92 643 aaKnown RBP8.31□□□□□ -1.08
LINC01888-202ENST00000457602 CXorf40AQ8TE69 158 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 GDAP1L1Q96MZ0 367 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 ZNF578Q96N58 590 aaPredicted RBP8.31□□□□□ -1.08
LINC01888-202ENST00000457602 LENG8Q96PV6 779 aaPredicted RBP8.31□□□□□ -1.08
LINC01888-202ENST00000457602 KLF6Q99612 283 aaPredicted RBP8.31□□□□□ -1.08
LINC01888-202ENST00000457602 NCAPGQ9BPX3 1015 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 WRAP53Q9BUR4 548 aaKnown RBP8.31□□□□□ -1.08
LINC01888-202ENST00000457602 C1QTNF7Q9BXJ2 289 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 RETREG1Q9H6L5 497 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 POLR1BQ9H9Y6 1135 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 GPR27Q9NS67 375 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 NCKIPSDQ9NZQ3 722 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 APOBEC3BQ9UH17 382 aaKnown RBP8.31□□□□□ -1.08
LINC01888-202ENST00000457602 CSNK1G3Q9Y6M4 447 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 TDRD6O60522 2096 aaKnown RBP8.31□□□□□ -1.08
LINC01888-202ENST00000457602 ZFYVE26Q68DK2 2539 aa8.31□□□□□ -1.08
LINC01888-202ENST00000457602 LY6G6EA0A0G2JKS1 128 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 EME2A4GXA9 379 aaPredicted RBP8.3□□□□□ -1.08
LINC01888-202ENST00000457602 MUSKO15146 869 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 EPHB6O15197 1021 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 FBXO24O75426 580 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 TMCC1O94876 653 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 CALB1P05937 261 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 ANXA6P08133 673 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 UNGP13051 313 aaPredicted RBP8.3□□□□□ -1.08
LINC01888-202ENST00000457602 DESP17661 470 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 CHRNB2P17787 502 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 ITIH2P19823 946 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 TGM2P21980 687 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 RBMS1P29558 406 aaKnown RBP8.3□□□□□ -1.08
LINC01888-202ENST00000457602 RFC1P35251 1148 aaPredicted RBP8.3□□□□□ -1.08
LINC01888-202ENST00000457602 IGFALSP35858 605 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 EIF4A3P38919 411 aaKnown RBP8.3□□□□□ -1.08
LINC01888-202ENST00000457602 LSSP48449 732 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 ADKP55263 362 aaKnown RBP8.3□□□□□ -1.08
LINC01888-202ENST00000457602 RHOAP61586 193 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 TLE3Q04726 772 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 EIF2B5Q13144 721 aaKnown RBP8.3□□□□□ -1.08
LINC01888-202ENST00000457602 KRT31Q15323 416 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 ISXQ2M1V0 245 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 CT47A1Q5JQC4 288 aaPredicted RBP8.3□□□□□ -1.08
LINC01888-202ENST00000457602 TPRG1LQ5T0D9 272 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 CFAP58Q5T655 872 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 WDR59Q6PJI9 974 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 DNAJC14Q6Y2X3 702 aaPredicted RBP8.3□□□□□ -1.08
LINC01888-202ENST00000457602 PHACTR4Q8IZ21 702 aa8.3□□□□□ -1.08
LINC01888-202ENST00000457602 PYROXD2Q8N2H3 581 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms