RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 TSHRP16473 764 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 CKMT2P17540 419 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 PTPN7P35236 360 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 DUSP3P51452 185 aaPredicted RBP23.19■■□□□ 1.3
CBX3-204ENST00000456948 DAB2P98082 770 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 EIF2B5Q13144 721 aaKnown RBP23.19■■□□□ 1.3
CBX3-204ENST00000456948 ILKQ13418 452 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 CCDC157Q569K6 752 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 PNCKQ6P2M8 343 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 RAB44Q7Z6P3 723 aaPredicted RBP23.19■■□□□ 1.3
CBX3-204ENST00000456948 SLCO6A1Q86UG4 719 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 PHACTR4Q8IZ21 702 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 GALNT15Q8N3T1 639 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 SDR16C5Q8N3Y7 309 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 ZNF548Q8NEK5 533 aaPredicted RBP23.19■■□□□ 1.3
CBX3-204ENST00000456948 LPCAT1Q8NF37 534 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 LMX1AQ8TE12 382 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 GLMNQ92990 594 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 DTD2Q96FN9 168 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 IMP4Q96G21 291 aaKnown RBP23.19■■□□□ 1.3
CBX3-204ENST00000456948 SRPK1Q96SB4 655 aaKnown RBP23.19■■□□□ 1.3
CBX3-204ENST00000456948 WDR26Q9H7D7 661 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 USP29Q9HBJ7 922 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 GLOD4Q9HC38 313 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 PHPT1Q9NRX4 125 aaPredicted RBP23.19■■□□□ 1.3
CBX3-204ENST00000456948 KLHL8Q9P2G9 620 aaPredicted RBP23.19■■□□□ 1.3
CBX3-204ENST00000456948 KLQ9UEF7 1012 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 TRHDEQ9UKU6 1024 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 DOLKQ9UPQ8 538 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 NEUROG3Q9Y4Z2 214 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 OR1A2Q9Y585 309 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 COL5A1P20908 1838 aaPredicted RBP23.19■■□□□ 1.3
CBX3-204ENST00000456948 GOLGA6CA6NDK9 693 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 GOLGA6BA6NDN3 693 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 H7C0C1 242 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 STK10O94804 968 aaKnown RBP23.18■■□□□ 1.3
CBX3-204ENST00000456948 TNFP01375 233 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 ALPIP09923 528 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 GOLGA6DP0CG33 693 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 PECAM1P16284 738 aaPredicted RBP23.18■■□□□ 1.3
CBX3-204ENST00000456948 ATP5OP48047 213 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 SKOR1P84550 965 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 ELOCQ15369 112 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 PRRT3Q5FWE3 981 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 LRRC66Q68CR7 880 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 HID1Q8IV36 788 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 FSTL5Q8N475 847 aaPredicted RBP23.18■■□□□ 1.3
CBX3-204ENST00000456948 CHCHD4Q8N4Q1 142 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 PNPLA1Q8N8W4 532 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 HTR3CQ8WXA8 447 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 RBM15Q96T37 977 aaKnown RBP eCLIP23.18■■□□□ 1.32e-7■□□□□ 8.2
CBX3-204ENST00000456948 SCNM1Q9BWG6 230 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 CEP41Q9BYV8 373 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 UCKL1Q9NWZ5 548 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 GOLGA6AQ9NYA3 693 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 ADGRG1Q9Y653 693 aa23.18■■□□□ 1.3
CBX3-204ENST00000456948 CAPN8A6NHC0 703 aa23.17■■□□□ 1.3
CBX3-204ENST00000456948 TPP1O14773 563 aa23.17■■□□□ 1.3
CBX3-204ENST00000456948 SIGLEC6O43699 453 aa23.17■■□□□ 1.3
CBX3-204ENST00000456948 HYAL3O43820 417 aaPredicted RBP23.17■■□□□ 1.3
CBX3-204ENST00000456948 PTPN3P26045 913 aa23.17■■□□□ 1.3
CBX3-204ENST00000456948 TRIM23P36406 574 aa23.17■■□□□ 1.3
CBX3-204ENST00000456948 ETV3P41162 512 aa23.17■■□□□ 1.3
CBX3-204ENST00000456948 HK3P52790 923 aa23.17■■□□□ 1.3
CBX3-204ENST00000456948 KIAA1024LP59773 190 aa23.17■■□□□ 1.3
CBX3-204ENST00000456948 CRTC1Q6UUV9 634 aa23.17■■□□□ 1.3
CBX3-204ENST00000456948 PID1Q7Z2X4 250 aa23.17■■□□□ 1.3
CBX3-204ENST00000456948 NRSN1Q8IZ57 195 aa23.17■■□□□ 1.3
CBX3-204ENST00000456948 CBARPQ8N350 705 aaPredicted RBP23.17■■□□□ 1.3
CBX3-204ENST00000456948 TTC13Q8NBP0 860 aa23.17■■□□□ 1.3
CBX3-204ENST00000456948 ARID1BQ8NFD5 2236 aaPredicted RBP23.17■■□□□ 1.3
CBX3-204ENST00000456948 ACACBO00763 2458 aa23.17■■□□□ 1.3
CBX3-204ENST00000456948 TNFRSF10CO14798 259 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 RFPL3O75679 317 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 ANXA6P08133 673 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 MMP2P08253 660 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 CCDC175P0C221 793 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 LHCGRP22888 699 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 RPIAP49247 311 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 SRP54P61011 504 aaKnown RBP23.16■■□□□ 1.3
CBX3-204ENST00000456948 CDK18Q07002 472 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 DPTQ07507 201 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 ADCY2Q08462 1091 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 ST3GAL2Q16842 350 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 RAET1GQ6H3X3 334 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 ZCCHC8Q6NZY4 707 aaKnown RBP23.16■■□□□ 1.3
CBX3-204ENST00000456948 Q6ZVL8 140 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 RD3Q7Z3Z2 195 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 HSD11B1LQ7Z5J1 315 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 TSPAN33Q86UF1 283 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 NLRP8Q86W28 1048 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 CDKL3Q8IVW4 592 aaPredicted RBP23.16■■□□□ 1.3
CBX3-204ENST00000456948 FAM181AQ8N9Y4 354 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 PLA2G15Q8NCC3 412 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 OR56A4Q8NGH8 313 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 QKIQ96PU8 341 aaKnown RBP eCLIP23.16■■□□□ 1.3
CBX3-204ENST00000456948 LYSMD1Q96S90 227 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 PKD2L2Q9NZM6 624 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 TRIM10Q9UDY6 481 aa23.16■■□□□ 1.3
CBX3-204ENST00000456948 GUCA1BQ9UMX6 200 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms