RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 A0A0U1RQS6 177 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 OR51F1A6NGY5 319 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 FAM47DPA6NHR8 397 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 A6NNZ2 444 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 GOLGA8RI6L899 631 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 SHOX2O60902 331 aaPredicted RBP13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 LEFTY1O75610 366 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 ALDOAP04075 364 aaKnown RBP13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 OGNP20774 298 aaKnown RBP13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 HMGCLP35914 325 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 LEPRP48357 1165 aaKnown RBP13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 SOX9P48436 509 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 GUCY1A3Q02108 690 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 PPARDQ03181 441 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 CCDC85BQ15834 202 aaPredicted RBP13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 TUBB8Q3ZCM7 444 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 ARSIQ5FYB1 569 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 FSTL4Q6MZW2 842 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 BRAT1Q6PJG6 821 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 AFTPHQ6ULP2 937 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 TPRG1Q6ZUI0 275 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 CILP2Q8IUL8 1156 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 SUGP1Q8IWZ8 645 aaKnown RBP13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 NDUFAF2Q8N183 169 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 DCLK2Q8N568 766 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 PAF1Q8N7H5 531 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 ZNF366Q8N895 744 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 OR4L1Q8NH43 312 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 GRIN3AQ8TCU5 1115 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 HCAR2Q8TDS4 363 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 ATXN2LQ8WWM7 1075 aaKnown RBP13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 EID2BQ96D98 161 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 SCRN2Q96FV2 425 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 APOPT1Q96IL0 206 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 CDX2Q99626 313 aaPredicted RBP13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 GPR22Q99680 433 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 ZFYVE1Q9HBF4 777 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 TRPV5Q9NQA5 729 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 MKS1Q9NXB0 559 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 MARCH4Q9P2E8 410 aaPredicted RBP13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 DKK3Q9UBP4 350 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 STARD13Q9Y3M8 1113 aa13.05□□□□□ -0.32
CASC4P1-201ENST00000456608 PLXNA2O75051 1894 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 TPP1O14773 563 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 CD3EAPO15446 510 aaKnown RBP13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 HAUS5O94927 633 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 S1PR4O95977 384 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 HLA-EP13747 358 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 HNRNPLP14866 589 aaKnown RBP eCLIP13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 FOXN2P32314 431 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 HADHAP40939 763 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 IL12RB1P42701 662 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 ABCG1P45844 678 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 CD151P48509 253 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 POLD2P49005 469 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 CSRP3P50461 194 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 GALK1P51570 392 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 NEK3P51956 506 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 POLR2LP62875 67 aaKnown RBP13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 XIAPP98170 497 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 GABPB1Q06547 395 aaPredicted RBP13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 PEX6Q13608 980 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 SEMA3AQ14563 771 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 C9orf64Q5T6V5 341 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 PRPF38BQ5VTL8 546 aaKnown RBP13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 EGFLAMQ63HQ2 1017 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 CRTC1Q6UUV9 634 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 NUDT18Q6ZVK8 323 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 USP45Q70EL2 814 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 STK40Q8N2I9 435 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 ANKRD42Q8N9B4 389 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 SCG3Q8WXD2 468 aaKnown RBP13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 P2RY13Q9BPV8 354 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 FBRSL1Q9HCM7 1045 aaKnown RBP13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 BPIFA1Q9NP55 256 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 FBXO6Q9NRD1 293 aaPredicted RBP13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 CATSPERZQ9NTU4 200 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 INTS9Q9NV88 658 aaKnown RBP13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 NKIRAS1Q9NYS0 192 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 FKBPLQ9UIM3 349 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 ATG2BQ96BY7 2078 aa13.04□□□□□ -0.32
CASC4P1-201ENST00000456608 C1orf232A0A0U1RR37 186 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 ANTXRLA6NF34 631 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 NPIPB15A6NHN6 443 aaPredicted RBP13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 UPK3BL1B0FP48 263 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 UPK3BL2E5RIL1 263 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 COPEO14579 308 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 ZWINTO95229 277 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 CLDN7O95471 211 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 SLC4A1P02730 911 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 PRNPP04156 253 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 TIMP2P16035 220 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 MC4RP32245 332 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 RPA3P35244 121 aaPredicted RBP13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 TNFRSF4P43489 277 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 SERPINB8P50452 374 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 WDR4P57081 412 aaKnown RBP13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 GNGT1P63211 74 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 ENPP2Q13822 863 aa13.03□□□□□ -0.32
CASC4P1-201ENST00000456608 TYSND1Q2T9J0 566 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms