RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ZNF423Q2M1K9 1284 aa15.08■□□□□ 0
LDLR-202ENST00000455727 CHST9Q7L1S5 443 aa15.08■□□□□ 0
LDLR-202ENST00000455727 LRRC43Q8N309 656 aa15.08■□□□□ 0
LDLR-202ENST00000455727 OR7D4Q8NG98 312 aa15.08■□□□□ 0
LDLR-202ENST00000455727 OR52K2Q8NGK3 314 aa15.08■□□□□ 0
LDLR-202ENST00000455727 OR13C4Q8NGS5 318 aa15.08■□□□□ 0
LDLR-202ENST00000455727 GATA6Q92908 595 aa15.08■□□□□ 0
LDLR-202ENST00000455727 CDRT15Q96T59 188 aa15.08■□□□□ 0
LDLR-202ENST00000455727 CINPQ9BW66 212 aaPredicted RBP15.08■□□□□ 0
LDLR-202ENST00000455727 ERVK-6Q9BXR3 956 aa15.08■□□□□ 0
LDLR-202ENST00000455727 NACA2Q9H009 215 aa15.08■□□□□ 0
LDLR-202ENST00000455727 CWH43Q9H720 699 aa15.08■□□□□ 0
LDLR-202ENST00000455727 HSFX1Q9UBD0 423 aa15.08■□□□□ 0
LDLR-202ENST00000455727 TRAF6Q9Y4K3 522 aa15.08■□□□□ 0
LDLR-202ENST00000455727 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.08■□□□□ 0
LDLR-202ENST00000455727 CASQ2O14958 399 aaPredicted RBP15.08■□□□□ 0
LDLR-202ENST00000455727 ZNF37AP17032 561 aaPredicted RBP15.08■□□□□ 0
LDLR-202ENST00000455727 PLK1P53350 603 aa15.08■□□□□ 0
LDLR-202ENST00000455727 OXCT1P55809 520 aa15.08■□□□□ 0
LDLR-202ENST00000455727 CDC16Q13042 620 aa15.08■□□□□ 0
LDLR-202ENST00000455727 SQLEQ14534 574 aa15.08■□□□□ 0
LDLR-202ENST00000455727 SEMA3AQ14563 771 aa15.08■□□□□ 0
LDLR-202ENST00000455727 MAPRE2Q15555 327 aa15.08■□□□□ 0
LDLR-202ENST00000455727 TCTN1Q2MV58 587 aa15.08■□□□□ 0
LDLR-202ENST00000455727 USP41Q3LFD5 358 aa15.08■□□□□ 0
LDLR-202ENST00000455727 PIM3Q86V86 326 aa15.08■□□□□ 0
LDLR-202ENST00000455727 PTERQ96BW5 349 aa15.08■□□□□ 0
LDLR-202ENST00000455727 ZNF512Q96ME7 567 aaPredicted RBP15.08■□□□□ 0
LDLR-202ENST00000455727 TCF12Q99081 682 aa15.08■□□□□ 0
LDLR-202ENST00000455727 AARSD1Q9BTE6 412 aaKnown RBP15.08■□□□□ 0
LDLR-202ENST00000455727 WDR41Q9HAD4 459 aa15.08■□□□□ 0
LDLR-202ENST00000455727 TNFRSF12AQ9NP84 129 aa15.08■□□□□ 0
LDLR-202ENST00000455727 POLR3BQ9NW08 1133 aaPredicted RBP15.08■□□□□ 0
LDLR-202ENST00000455727 H3BNX3 289 aa15.07■□□□□ 0
LDLR-202ENST00000455727 INSIG1O15503 277 aa15.07■□□□□ 0
LDLR-202ENST00000455727 ADAM12O43184 909 aa15.07■□□□□ 0
LDLR-202ENST00000455727 GJB5O95377 273 aa15.07■□□□□ 0
LDLR-202ENST00000455727 ZNF140P52738 457 aaPredicted RBP15.07■□□□□ 0
LDLR-202ENST00000455727 C1QTNF8P60827 252 aa15.07■□□□□ 0
LDLR-202ENST00000455727 STX5Q13190 355 aa15.07■□□□□ 0
LDLR-202ENST00000455727 PTPRCAPQ14761 206 aa15.07■□□□□ 0
LDLR-202ENST00000455727 UNC50Q53HI1 259 aa15.07■□□□□ 0
LDLR-202ENST00000455727 CAPRIN2Q6IMN6 1127 aaKnown RBP15.07■□□□□ 0
LDLR-202ENST00000455727 EFCAB3Q8N7B9 438 aa15.07■□□□□ 0
LDLR-202ENST00000455727 SH3RF2Q8TEC5 729 aa15.07■□□□□ 0
LDLR-202ENST00000455727 VCXQ9H320 206 aa15.07■□□□□ 0
LDLR-202ENST00000455727 TFB2MQ9H5Q4 396 aaKnown RBP15.07■□□□□ 0
LDLR-202ENST00000455727 ADAMTS6Q9UKP5 1117 aa15.07■□□□□ 0
LDLR-202ENST00000455727 MAGEA13PA6NCF6 341 aa15.06■□□□□ 0
LDLR-202ENST00000455727 UBFD1O14562 309 aaKnown RBP15.06■□□□□ 0
LDLR-202ENST00000455727 UBDO15205 165 aa15.06■□□□□ 0
LDLR-202ENST00000455727 COCHO43405 550 aa15.06■□□□□ 0
LDLR-202ENST00000455727 PEX1O43933 1283 aa15.06■□□□□ 0
LDLR-202ENST00000455727 SKAP2O75563 359 aaPredicted RBP15.06■□□□□ 0
LDLR-202ENST00000455727 TRPA1O75762 1119 aa15.06■□□□□ 0
LDLR-202ENST00000455727 FGF4P08620 206 aa15.06■□□□□ 0
LDLR-202ENST00000455727 PMLP29590 882 aa15.06■□□□□ 0
LDLR-202ENST00000455727 OR1D2P34982 312 aa15.06■□□□□ 0
LDLR-202ENST00000455727 RPS24P62847 133 aaKnown RBP15.06■□□□□ 0
LDLR-202ENST00000455727 TAF1AQ15573 450 aaPredicted RBP15.06■□□□□ 0
LDLR-202ENST00000455727 TMEM154Q6P9G4 183 aa15.06■□□□□ 0
LDLR-202ENST00000455727 PDSS2Q86YH6 399 aa15.06■□□□□ 0
LDLR-202ENST00000455727 DENND1CQ8IV53 801 aa15.06■□□□□ 0
LDLR-202ENST00000455727 MARK4Q96L34 752 aa15.06■□□□□ 0
LDLR-202ENST00000455727 MYRFLQ96LU7 910 aa15.06■□□□□ 0
LDLR-202ENST00000455727 PRICKLE1Q96MT3 831 aaPredicted RBP15.06■□□□□ 0
LDLR-202ENST00000455727 SPON2Q9BUD6 331 aa15.06■□□□□ 0
LDLR-202ENST00000455727 KLHL4Q9C0H6 718 aa15.06■□□□□ 0
LDLR-202ENST00000455727 SYTL2Q9HCH5 934 aa15.06■□□□□ 0
LDLR-202ENST00000455727 TBC1D30Q9Y2I9 924 aa15.06■□□□□ 0
LDLR-202ENST00000455727 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.06■□□□□ 0
LDLR-202ENST00000455727 STC2O76061 302 aa15.06■□□□□ 0
LDLR-202ENST00000455727 SUPT7LO94864 414 aa15.06■□□□□ 0
LDLR-202ENST00000455727 SLC4A1P02730 911 aa15.06■□□□□ 0
LDLR-202ENST00000455727 KLKB1P03952 638 aa15.06■□□□□ 0
LDLR-202ENST00000455727 RAG1P15918 1043 aa15.06■□□□□ 0
LDLR-202ENST00000455727 HMGA1P17096 107 aaKnown RBP15.06■□□□□ 0
LDLR-202ENST00000455727 ME2P23368 584 aa15.06■□□□□ 0
LDLR-202ENST00000455727 PSMD8P48556 350 aa15.06■□□□□ 0
LDLR-202ENST00000455727 ALDH7A1P49419 539 aaKnown RBP15.06■□□□□ 0
LDLR-202ENST00000455727 THOP1P52888 689 aa15.06■□□□□ 0
LDLR-202ENST00000455727 ZNF177Q13360 481 aaPredicted RBP15.06■□□□□ 0
LDLR-202ENST00000455727 PTK2BQ14289 1009 aa15.06■□□□□ 0
LDLR-202ENST00000455727 ZFP1Q6P2D0 407 aa15.06■□□□□ 0
LDLR-202ENST00000455727 AFTPHQ6ULP2 937 aa15.06■□□□□ 0
LDLR-202ENST00000455727 RNF168Q8IYW5 571 aaPredicted RBP15.06■□□□□ 0
LDLR-202ENST00000455727 UCMAQ8WVF2 138 aa15.06■□□□□ 0
LDLR-202ENST00000455727 PPP2R3CQ969Q6 453 aa15.06■□□□□ 0
LDLR-202ENST00000455727 CAPNS2Q96L46 248 aa15.06■□□□□ 0
LDLR-202ENST00000455727 MRPL1Q9BYD6 325 aaKnown RBP15.06■□□□□ 0
LDLR-202ENST00000455727 C6orf203Q9P0P8 240 aaPredicted RBP15.06■□□□□ 0
LDLR-202ENST00000455727 AFF4Q9UHB7 1163 aaKnown RBP15.06■□□□□ 0
LDLR-202ENST00000455727 PSMD13Q9UNM6 376 aa15.06■□□□□ 0
LDLR-202ENST00000455727 SCN5AQ14524 2016 aa15.06■□□□□ 0
LDLR-202ENST00000455727 A0A1B0GVM2 712 aa15.05■□□□□ 0
LDLR-202ENST00000455727 RHOCP08134 193 aa15.05■□□□□ 0
LDLR-202ENST00000455727 PIRTP0C851 137 aa15.05■□□□□ 0
LDLR-202ENST00000455727 ENO3P13929 434 aaPredicted RBP15.05■□□□□ 0
LDLR-202ENST00000455727 RGRP47804 291 aa15.05■□□□□ 0
LDLR-202ENST00000455727 ATP4BP51164 291 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms