RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 UBA7P41226 1012 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 MECP2P51608 486 aaKnown RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 CCR5P51681 352 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 CASP5P51878 434 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 KIF11P52732 1056 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 INHBCP55103 352 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 SESN2P58004 480 aaPredicted RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 ADAM8P78325 824 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 HMGN5P82970 282 aaKnown RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 COG7P83436 770 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 GOLGA8FQ08AF8 430 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 GOLGA8DPQ0D2H9 430 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 OVGP1Q12889 678 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 DHX8Q14562 1220 aaKnown RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 SMN1Q16637 294 aaKnown RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 ISXQ2M1V0 245 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 TTC31Q49AM3 519 aaPredicted RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 RILPL1Q5EBL4 403 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 NCEH1Q6PIU2 408 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 GPRIN1Q7Z2K8 1008 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 SCD5Q86SK9 330 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 CLEC14AQ86T13 490 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 IQCHQ86VS3 1027 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 LDLRAD3Q86YD5 345 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 CBWD2Q8IUF1 395 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 CCDC83Q8IWF9 413 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 ZC3H3Q8IXZ2 948 aaKnown RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 CRYBG2Q8N1P7 616 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 GPD1LQ8N335 351 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 ZNF366Q8N895 744 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 OR5AN1Q8NGI8 311 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 THAP3Q8WTV1 239 aaPredicted RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 LARP4BQ92615 738 aaKnown RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 GOLGA1Q92805 767 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 FAM131CQ96AQ9 280 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 SLC7A6OSQ96CW6 309 aaPredicted RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 CALML4Q96GE6 196 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 CDK5RAP3Q96JB5 506 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 VCPIP1Q96JH7 1222 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 TNIP3Q96KP6 325 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 ACCSQ96QU6 501 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 SRPK1Q96SB4 655 aaKnown RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.82□□□□□ -1.82e-6■□□□□ 8.8
RBM39-220ENST00000455343 FGFBP2Q9BYJ0 223 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 CIPCQ9C0C6 399 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 NACA2Q9H009 215 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 RSPH9Q9H1X1 276 aaPredicted RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 NEUROG2Q9H2A3 272 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 SLC6A15Q9H2J7 730 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 PABPC3Q9H361 631 aaKnown RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 ZHX3Q9H4I2 956 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 PNPLA8Q9NP80 782 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 CLIC5Q9NZA1 410 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 C11orf21Q9P2W6 132 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 SAE1Q9UBE0 346 aaPredicted RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 STOML2Q9UJZ1 356 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 AGO1Q9UL18 857 aaKnown RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 EXOC7Q9UPT5 735 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 PCDHGA8Q9Y5G5 932 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 HEMK1Q9Y5R4 338 aaPredicted RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 U3KQA8 63 aa3.82□□□□□ -1.8
RBM39-220ENST00000455343 TLN1Q9Y490 2541 aaKnown RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 SPTAN1Q13813 2472 aaKnown RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 MYO18AQ92614 2054 aaKnown RBP3.82□□□□□ -1.8
RBM39-220ENST00000455343 ANK1P16157 1881 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 AHCTF1Q8WYP5 2266 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 A0A1B0GVM2 712 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 FAM47DPA6NHR8 397 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 LRRC72A6NJI9 287 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 H2AFYO75367 372 aaKnown RBP3.81□□□□□ -1.8
RBM39-220ENST00000455343 CSO75390 466 aaKnown RBP3.81□□□□□ -1.8
RBM39-220ENST00000455343 PRPF6O94906 941 aaKnown RBP3.81□□□□□ -1.8
RBM39-220ENST00000455343 TNNC2P02585 160 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 KRT18P05783 430 aaKnown RBP3.81□□□□□ -1.8
RBM39-220ENST00000455343 DLDP09622 509 aaKnown RBP3.81□□□□□ -1.8
RBM39-220ENST00000455343 SFTPCP11686 197 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 GAP43P17677 238 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 MAKP20794 623 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 DGKAP23743 735 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 HOXD9P28356 352 aaPredicted RBP3.81□□□□□ -1.8
RBM39-220ENST00000455343 ATICP31939 592 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 HOXD13P35453 343 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 HARS2P49590 506 aaKnown RBP3.81□□□□□ -1.8
RBM39-220ENST00000455343 NEK4P51957 841 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 MYL6P60660 151 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 ROM1Q03395 351 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 TLE1Q04724 770 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 ALCAMQ13740 583 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 BMT2Q1RMZ1 405 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 HNRNPA1L2Q32P51 320 aaKnown RBP3.81□□□□□ -1.8
RBM39-220ENST00000455343 MPPE1Q53F39 396 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 C9orf64Q5T6V5 341 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 ZNF776Q68DI1 518 aaPredicted RBP3.81□□□□□ -1.8
RBM39-220ENST00000455343 NAPEPLDQ6IQ20 393 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 CLEC20AQ6ZU45 233 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 CHST9Q7L1S5 443 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 CCDC186Q7Z3E2 898 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 TADA2BQ86TJ2 420 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 KDM1BQ8NB78 822 aa3.81□□□□□ -1.8
RBM39-220ENST00000455343 OR2T34Q8NGX1 318 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms