RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 A8MX80 341 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 MFSD11O43934 449 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 CCNB1P14635 433 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 PNLIPP16233 465 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 ZFXP17010 805 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 TGM2P21980 687 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 RBMS1P29558 406 aaKnown RBP17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 SLC1A1P43005 524 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 MAXP61244 160 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 GABREP78334 506 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 TRAF2Q12933 501 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 MMRN1Q13201 1228 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 EIF3IQ13347 325 aaKnown RBP17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 CNGA3Q16281 694 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 ASTE1Q2TB18 679 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 NLRP8Q86W28 1048 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 PLA2G15Q8NCC3 412 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 CCDC97Q96F63 343 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 DTD2Q96FN9 168 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 CCDC3Q9BQI4 270 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 GSDMCQ9BYG8 508 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 STRADBQ9C0K7 418 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 RBM22Q9NW64 420 aaKnown RBP eCLIP17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 MOSPD1Q9UJG1 213 aa17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 PNMA8BQ9ULN7 279 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF4-202ENST00000453580 PRSS38A1L453 326 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 MFAP3LO75121 409 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 CD48P09326 243 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 MYF5P13349 255 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 KDELR1P24390 212 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 UCNP55089 124 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 DPTQ07507 201 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 ILF3Q12906 894 aaKnown RBP eCLIP17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 MESDQ14696 234 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 LRRC38Q5VT99 294 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 BROXQ5VW32 411 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 DENND2CQ68D51 928 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 BZW1Q7L1Q6 419 aaKnown RBP17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 CBARPQ8N350 705 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 ARL14Q8N4G2 192 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 CCNYQ8ND76 341 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 FAM46DQ8NEK8 389 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 WDR36Q8NI36 951 aaKnown RBP17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 SLC35G2Q8TBE7 412 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 HDAC11Q96DB2 347 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 PDXPQ96GD0 296 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 TEX101Q9BY14 249 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 BRD8Q9H0E9 1235 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 NHEJ1Q9H9Q4 299 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 CYP4F12Q9HCS2 524 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 TRNAU1APQ9NX07 287 aaKnown RBP17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 DDX56Q9NY93 547 aaKnown RBP17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 PCDHB1Q9Y5F3 818 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 RP1P56715 2156 aa17.08■□□□□ 0.32
TNFRSF4-202ENST00000453580 LRRD1A4D1F6 860 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 TMEM202A6NGA9 273 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 MTA2O94776 668 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 GLB1P16278 677 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 PERM1Q5SV97 790 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 RAET1GQ6H3X3 334 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 OGFOD3Q6PK18 319 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 ZNF765Q7L2R6 523 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 CCDC13Q8IYE1 715 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 NRSN1Q8IZ57 195 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 KYQ8NBH2 561 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 PIH1D2Q8WWB5 315 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 OR1E3Q8WZA6 343 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 TMEM74Q96NL1 305 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 RNF157Q96PX1 679 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 GFM1Q96RP9 751 aaKnown RBP17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 LGMNQ99538 433 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 ADGRE3Q9BY15 652 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 FGF22Q9HCT0 170 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 LUC7LQ9NQ29 371 aaKnown RBP17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 SIRPGQ9P1W8 387 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 TTLL3Q9Y4R7 772 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 PCDHGA8Q9Y5G5 932 aa17.07■□□□□ 0.32
TNFRSF4-202ENST00000453580 CCDC187A0A096LP49 1063 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 A0A0J9YYE9 177 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 TTC24A2A3L6 582 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 GOLGA6CA6NDK9 693 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 GOLGA6BA6NDN3 693 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 NPIPB15A6NHN6 443 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 AKR1B15C9JRZ8 316 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 TLX3O43711 291 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 FZD6O60353 706 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 TRBC1P01850 177 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 MPOP05164 745 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 GOLGA6DP0CG33 693 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 GM2AP17900 193 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 ETV3P41162 512 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 GPR1P46091 355 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 TAS2R40P59535 323 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 CDK3Q00526 305 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 PDK1Q15118 436 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 ATP13A4Q4VNC1 1196 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 HEATR4Q86WZ0 1026 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 RHOT1Q8IXI2 618 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 GPR156Q8NFN8 814 aa17.06■□□□□ 0.32
TNFRSF4-202ENST00000453580 CCHCR1Q8TD31 782 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms