RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 GPBAR1Q8TDU6 330 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 NKD1Q969G9 470 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 SELENOOQ9BVL4 669 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 LGR4Q9BXB1 951 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 ATP13A3Q9H7F0 1226 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 CYP4F12Q9HCS2 524 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 SPATS2LQ9NUQ6 558 aaKnown RBP11.7□□□□□ -0.54
HERC3-207ENST00000452979 DONSONQ9NYP3 566 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 AHCTF1Q8WYP5 2266 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 B4DGG1 531 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 STMND1H3BQB6 276 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 ZW10O43264 779 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 CCP110O43303 1012 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 CREB3O43889 395 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 PRKCGP05129 697 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 FGF1P05230 155 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 CALB1P05937 261 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 FGF3P11487 239 aaPredicted RBP11.69□□□□□ -0.54
HERC3-207ENST00000452979 CCL4P13236 92 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 CCNB1P14635 433 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 SERPINA4P29622 427 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 NSFP46459 744 aaKnown RBP11.69□□□□□ -0.54
HERC3-207ENST00000452979 RGRP47804 291 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 ZNF75DP51815 510 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 OR1D5P58170 312 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 SQSTM1Q13501 440 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 GSE1Q14687 1217 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 CLEC16AQ2KHT3 1053 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 PPP1R15BQ5SWA1 713 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 SCYL2Q6P3W7 929 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 DPPA4Q7L190 304 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 NRROSQ86YC3 692 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 CBARPQ8N350 705 aaPredicted RBP11.69□□□□□ -0.54
HERC3-207ENST00000452979 TSEN2Q8NCE0 465 aaKnown RBP11.69□□□□□ -0.54
HERC3-207ENST00000452979 KIAA1524Q8TCG1 905 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 SPOCK2Q92563 424 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 TAAR9Q96RI9 348 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 TRIM5Q9C035 493 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 SLC39A8Q9C0K1 460 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 CDH19Q9H159 772 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 RDH14Q9HBH5 336 aa11.69□□□□□ -0.54
HERC3-207ENST00000452979 FAM207AQ9NSI2 230 aaPredicted RBP11.69□□□□□ -0.54
HERC3-207ENST00000452979 TRNAU1APQ9NX07 287 aaKnown RBP11.69□□□□□ -0.54
HERC3-207ENST00000452979 AKAP7Q9P0M2 348 aaPredicted RBP11.69□□□□□ -0.54
HERC3-207ENST00000452979 COL12A1Q99715 3063 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 IGHV5-10-1A0A0J9YXX1 117 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 PRSS38A1L453 326 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 TRAFD1O14545 582 aaPredicted RBP11.68□□□□□ -0.54
HERC3-207ENST00000452979 PALMO75781 387 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 FUCA1P04066 466 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 ELFN1P0C7U0 828 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 MYCLP1P12525 358 aaPredicted RBP11.68□□□□□ -0.54
HERC3-207ENST00000452979 CD1CP29017 333 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 GPR3P46089 330 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 PAPOLAP51003 745 aaKnown RBP11.68□□□□□ -0.54
HERC3-207ENST00000452979 LIMK2P53671 638 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 POLR2FP61218 127 aaKnown RBP11.68□□□□□ -0.54
HERC3-207ENST00000452979 TLE1Q04724 770 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 TRA2AQ13595 282 aaKnown RBP eCLIP11.68□□□□□ -0.54
HERC3-207ENST00000452979 RFTN1Q14699 578 aaPredicted RBP11.68□□□□□ -0.54
HERC3-207ENST00000452979 MAP9Q49MG5 647 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 BORAQ6PGQ7 559 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 PELI3Q8N2H9 469 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 COQ10AQ96MF6 247 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 NSMCE3Q96MG7 304 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 CNPY3Q9BT09 278 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 TEX101Q9BY14 249 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 WDR26Q9H7D7 661 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 KCTD5Q9NXV2 234 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 SPTA1P02549 2419 aa11.68□□□□□ -0.54
HERC3-207ENST00000452979 ARHGAP42A6NI28 874 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 RHPN2P1A8MT19 583 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 EIF3CLB5ME19 914 aaKnown RBP11.67□□□□□ -0.54
HERC3-207ENST00000452979 AGRPO00253 132 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 CBFA2T2O43439 604 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 ECEL1O95672 775 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 CEACAM5P06731 702 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 ALDH4A1P30038 563 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 ATP1A2P50993 1020 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 RPL7AP62424 266 aaKnown RBP11.67□□□□□ -0.54
HERC3-207ENST00000452979 BCL2L1Q07817 233 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 MON1BQ7L1V2 547 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 VSTM4Q8IW00 320 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 RCBTB1Q8NDN9 531 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 OR4D9Q8NGE8 314 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 ZNF564Q8TBZ8 553 aaPredicted RBP11.67□□□□□ -0.54
HERC3-207ENST00000452979 ZDHHC1Q8WTX9 485 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 MRFAP1L1Q96HT8 127 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 PSKH2Q96QS6 385 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 EIF3CQ99613 913 aaKnown RBP11.67□□□□□ -0.54
HERC3-207ENST00000452979 NUDT22Q9BRQ3 303 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 DDA1Q9BW61 102 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 GSDMCQ9BYG8 508 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 CARS2Q9HA77 564 aaKnown RBP11.67□□□□□ -0.54
HERC3-207ENST00000452979 NLRC4Q9NPP4 1024 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 TUBD1Q9UJT1 453 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 ST14Q9Y5Y6 855 aa11.67□□□□□ -0.54
HERC3-207ENST00000452979 TLN1Q9Y490 2541 aaKnown RBP11.67□□□□□ -0.54
HERC3-207ENST00000452979 A0A1W2PQ67 120 aa11.66□□□□□ -0.54
HERC3-207ENST00000452979 ANKRD62A6NC57 917 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms