RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 SDHAF4Q5VUM1 108 aa13.23□□□□□ -0.29
SMARCA4-205ENST00000450717 PQLC1Q8N2U9 271 aa13.23□□□□□ -0.29
SMARCA4-205ENST00000450717 AMER2Q8N7J2 671 aa13.23□□□□□ -0.29
SMARCA4-205ENST00000450717 KBTBD8Q8NFY9 601 aa13.23□□□□□ -0.29
SMARCA4-205ENST00000450717 OR52L1Q8NGH7 329 aa13.23□□□□□ -0.29
SMARCA4-205ENST00000450717 CORO1BQ9BR76 489 aa13.23□□□□□ -0.29
SMARCA4-205ENST00000450717 CLEC4MQ9H2X3 399 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-205ENST00000450717 KCNE2Q9Y6J6 123 aa13.23□□□□□ -0.29
SMARCA4-205ENST00000450717 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 TM7SF2O76062 418 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 PIRTP0C851 137 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 MPSTP25325 297 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 SLC7A2P52569 658 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 LIMK2P53671 638 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 MAPK11Q15759 364 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 CYP1B1Q16678 543 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 TRIM40Q6P9F5 258 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 ARHGAP36Q6ZRI8 547 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 POMGNT2Q8NAT1 580 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 SLC47A1Q96FL8 570 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 OR52E6Q96RD3 313 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 HNRNPABQ99729 332 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 PCDH12Q9NPG4 1184 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 PACSIN3Q9UKS6 424 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 H7C0S8 307 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 EPORP19235 508 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 YBEYP58557 167 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 GBE1Q04446 702 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 ZNHIT3Q15649 155 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 KNDC1Q76NI1 1749 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 ECHDC2Q86YB7 292 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 TMEM199Q8N511 208 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 PPP1R14AQ96A00 147 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 PANX1Q96RD7 426 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 GINS4Q9BRT9 223 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 TTPALQ9BTX7 342 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 MED1Q15648 1581 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 A0A0J9YYE9 177 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 MOXD2PA6NHM9 499 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 RFXANKO14593 260 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 CTPS1P17812 591 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 CDC25CP30307 473 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 SP3Q02447 781 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 ZIK1Q3SY52 487 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 SWT1Q5T5J6 900 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 FAM180AQ6UWF9 173 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 FAM13CQ8NE31 585 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 PPP1R13LQ8WUF5 828 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 KLHL5Q96PQ7 755 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 SLC38A2Q96QD8 506 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 VPS35Q96QK1 796 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 EIF2B3Q9NR50 452 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 RSL24D1Q9UHA3 163 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 MFHAS1Q9Y4C4 1052 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 E9PAM4 449 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 DHX15O43143 795 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 DGCR6Q14129 220 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 TCEA2Q15560 299 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 ARMC3Q5W041 872 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 HEATR4Q86WZ0 1026 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 GSTCDQ8NEC7 633 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 TRIM63Q969Q1 353 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 HSD3B7Q9H2F3 369 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 SIX2Q9NPC8 291 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 SPEF2Q9C093 1822 aa13.22□□□□□ -0.29
SMARCA4-205ENST00000450717 URADA6NGE7 173 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 TSC22D2O75157 780 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 EIF2B2P49770 351 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 THOP1P52888 689 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 MAPK10P53779 464 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 POU5F1Q01860 360 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 SCIMPQ6UWF3 145 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 KIAA0408Q6ZU52 694 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 ZNF540Q8NDQ6 660 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 STYXQ8WUJ0 223 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 SNX27Q96L92 541 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 NMUR2Q9GZQ4 415 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 POLR1BQ9H9Y6 1135 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 NFKBIL1Q9UBC1 381 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 POLR3HQ9Y535 204 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 L1CAMP32004 1257 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 USP46P62068 366 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 FAM46CQ5VWP2 391 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 RGMBQ6NW40 437 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 EFCAB3Q8N7B9 438 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 PHF10Q8WUB8 498 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 EXOC2Q96KP1 924 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 NPAS2Q99743 824 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 NTPCRQ9BSD7 190 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 PCDHB9Q9Y5E1 797 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 PIK3C2AO00443 1686 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 ATP6AP2A0A1C7CYW4 349 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 ATP6AP2O75787 350 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 UMPSP11172 480 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 PKMP14618 531 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 COPZ1P61923 177 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 PTSQ03393 145 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 NPY5RQ15761 445 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 PMF1Q6P1K2 205 aa13.21□□□□□ -0.29
SMARCA4-205ENST00000450717 FAM151BQ6UXP7 276 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms